Pinned Repositories
3P-CLR
5years
ABBA_BABA
Running ABBA BABA test in R
Accessing_public_genomic_data
Tutorials on accessing public reference and genomic data
AdmixTools
Tools test whether admixture occurred and more
Advanced_UNIX
module for the advanced UNIX workshop
alphafold
Open source code for AlphaFold.
angsbigd
angsd reanalysis of maize HM2 data
angus
Materials for Analyzing Next-Generation Sequencing (ANGUS) course.
awesome
Awesome resources on Bioinformatics, data science, machine learning, programming language (Python, Golang, R, Perl) and miscellaneous stuff.
b1234561's Repositories
b1234561/5years
b1234561/alphafold
Open source code for AlphaFold.
b1234561/awesome-single-cell
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
b1234561/BitTigerLab
沁原的硅谷创新课
b1234561/canola_pseudomonas_RNAseq
Code and workflows related to RNAseq data from infected and control canola plants
b1234561/clusterProfiler
:bar_chart:statistical analysis and visualization of functional profiles for genes and gene clusters
b1234561/D3-graph-gallery
A collection of simple graphics made with D3.js
b1234561/data_to_art
Turning data into art
b1234561/data_to_viz
Leading to the dataviz you need
b1234561/DeepGP
A tool to implement Genomic Prediction Experiments using Deep Learning
b1234561/DGE_workshop_salmon
b1234561/DLpipeline
Practical Deep Learning for Genomic Prediction: A Keras based guide to implement deep learning
b1234561/eagle
b1234561/epuRate
A clean R Markdown template for your reports
b1234561/faceswap
Non official project based on original /r/Deepfakes thread. Many thanks to him!
b1234561/FriendsDontLetFriends
Friends don't let friends make certain types of data visualization - What are they and why are they bad.
b1234561/GEO
b1234561/LD-annot
Practical program to annotate candidate polymorphism using annotations for genes in linkage disequilibrium in the specific experiment.
b1234561/minigraph
Proof-of-concept seq-to-graph mapper and graph generator
b1234561/minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
b1234561/Online_R_learning
Online R learning for applied statistics
b1234561/R-graph-gallery
A website that displays hundreds of R charts
b1234561/scRNA_smart_seq2
b1234561/SeedGerm
SeedGerm: automated seed phenotyping
b1234561/SimpleTidy_GeneCoEx
A simple gene co-expression analyses workflow powered by tidyverse and graph analyses
b1234561/Sorghum_pangenome
Sorghum pangenome analysis
b1234561/spatial-bonemarrow-atlas
This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Proteomic Profiling Reveals the Cellular Composition and Spatial Organization of the Human Bone Marrow Microenvironment"
b1234561/The-Python-Graph-Gallery
A website displaying hundreds of charts made with Python
b1234561/Training-modules
Materials for short, half-day workshops
b1234561/usadellab.github.io