b8307038

Pinned Repositories

arm-workshop-rsc2019
Materials for the rstudio::conf 2019 Advanced R Markdown workshop
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autopvs1
An automatic classification tool for PVS1 interpretation of null variants
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autospill
R package: AutoSpill algorithm for calculating spillover coefficients to compensate or unmix high-parameter flow cytometry data
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CDSeq_R_Package
CDSeq R Package
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CellR
CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq
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cfdr
Implements conditional false-discovery rate hypothesis testing, used to perform high-dimensional hypothesis tests.
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cfdr_pipeline
Pipeline to generate all results in manuscript 'Accurate error control in high dimensional association testing using conditional false discovery rates', by James Liley and Chris Wallace
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cols4all
Colors for all (R package)
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cyCombine
Robust Integration of Single-Cell Cytometry Datasets
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CyTOF_analysis_Pipeline1
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b8307038's Repositories

b8307038/autopvs1
An automatic classification tool for PVS1 interpretation of null variants
Language:Python00
b8307038/autospill
R package: AutoSpill algorithm for calculating spillover coefficients to compensate or unmix high-parameter flow cytometry data
Language:R0 0 00
b8307038/CDSeq_R_Package
CDSeq R Package
Language:R00
b8307038/cols4all
Colors for all (R package)
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b8307038/cyCombine
Robust Integration of Single-Cell Cytometry Datasets
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b8307038/CyTOF_analysis_Pipeline1
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b8307038/Cytoscape_workflows
collection of notebooks with different cytoscape workflows
b8307038/data.table
R's data.table package extends data.frame:
b8307038/dataviz
A book covering the fundamentals of data visualization
b8307038/dotfiles
Let's be honest: mostly Emacs.
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b8307038/emacs-from-scratch
An example of a fully custom Emacs configuration developed live on YouTube!
b8307038/ERGO-II
ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction
b8307038/forestplot
:exclamation: This is a read-only mirror of the CRAN R package repository. forestplot — Advanced Forest Plot Using 'grid' Graphics. Homepage: https://gforge.se/packages/ Report bugs for this package: https://github.com/gforge/forestplot/issues
b8307038/GSEA_R
Updated implementation of the GSEA-P R application for modern R distributions
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b8307038/here
A simpler way to find your files
b8307038/jake-emacs
My personal Emacs configuation.
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b8307038/MIND
Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution
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b8307038/Olivia
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b8307038/patterns
A curated collection of Nextflow implementation patterns
b8307038/poisson.mash.alpha
An R package for Poisson multivariate adaptive shrinkage.
b8307038/preNivolumabOnNivolumab
EDA, QC, and DESeq2 / edgeR analysis of 109 RNA-seq samples of immunotherapy treatment
b8307038/pyrepseq
Python library for immune repertoire analysis
b8307038/Rodeo
b8307038/rstudio4edu-book
Organizing rstudio4edu project progress
b8307038/staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
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b8307038/stat545
A :book: on data wrangling, exploration, & analysis with R - created by Jenny Bryan, made with bookdown
b8307038/TCR-profiling-benchmark
b8307038/training
Nextflow training material
b8307038/variantValidator
Public repository for VariantValidator project
b8307038/WGCNA_Meta-analysis_BreastCancer
WGCNA meta-analysis of two breast cancer datasets