bailey-c

Pinned Repositories

AmpliconArchitect
Identify one or more connected, focally amplified genomic regions to elucidate the architecture of focal amplifications such as ecDNA.
Language:Python00
Epi_R_handbook
R handbook for field epidemiologists
Language:HTML00
fragCounter
GC and mappability corrected fragment coverage for paired end whole genome sequencing
Language:R00
JaBbA
MIP based joint inference of copy number and rearrangement state in cancer whole genome sequence data.
Language:R00
NATURE-2023-07-11819A
Analysis and code to generate figures for the manuscript "Origins and impact of extrachromosomal DNA"
00
PhylogicNDT
Language:HTML00
THELANCET-D-23-01260
Analysis code for "Independent SARS-CoV-2 staff testing protected NHS hospitals, care homes and academic institutions in Northwest London"
Language:R00
tx_germline_snps
Running burden testing with SKAT on TRACERx data
Language:R00

bailey-c's Repositories

bailey-c/NATURE-2023-07-11819A
Analysis and code to generate figures for the manuscript "Origins and impact of extrachromosomal DNA"
bailey-c/THELANCET-D-23-01260
Analysis code for "Independent SARS-CoV-2 staff testing protected NHS hospitals, care homes and academic institutions in Northwest London"
Language:R
bailey-c/JaBbA
MIP based joint inference of copy number and rearrangement state in cancer whole genome sequence data.
bailey-c/fragCounter
GC and mappability corrected fragment coverage for paired end whole genome sequencing
Language:R
bailey-c/Epi_R_handbook
R handbook for field epidemiologists
bailey-c/AmpliconArchitect
Identify one or more connected, focally amplified genomic regions to elucidate the architecture of focal amplifications such as ecDNA.
bailey-c/tx_germline_snps
Running burden testing with SKAT on TRACERx data
bailey-c/PhylogicNDT