Pinned Repositories
aminos
Map sequencing variants to proteins at biobank-scale
casio-simplex
A program written in Casio Basic that runs a three variable simplex tableau algorithm
Effective-Quadratures
Machine learning with polynomials
fourier-slides
Physics Presentation - Fourier Transformation
minBERT
A minimal PyTorch implementation of BERT (Bidirectional Encoder Representations from Transformers)
optimise-the-world
Execute gradient descent on the world.
equadratures
hail-on-dnanexus
An unofficial alternative to DXJupyterlab Spark Cluster App
live
🎧 Chat with Ableton Live in your browser.
vst
🎹 Generate sounds from words. Directly in your DAW.
barneyhill's Repositories
barneyhill/minBERT
A minimal PyTorch implementation of BERT (Bidirectional Encoder Representations from Transformers)
barneyhill/aminos
Map sequencing variants to proteins at biobank-scale
barneyhill/ttp
TankTroublePRO
barneyhill/AudioLDM
AudioLDM: Generate speech, sound effects, music and beyond, with text.
barneyhill/LiStPy
Vectorised Li and Stephens implementation in PyTorch
barneyhill/aminosgym
barneyhill/BRaVa_curation
barneyhill/ch-demo
barneyhill/clingen-svi-comp_calibration
Data and code associated with ClinGen-SVI computational sub-group's calibration paper
barneyhill/companies-viz
barneyhill/depict-applet
DEPICT DNAnexus applet
barneyhill/diploid2haploid
barneyhill/fastDTWF
fast methods for computing likelihoods under the discrete-time Wright Fisher model
barneyhill/GradME
Leaping through tree space: continuous phylogenetic inference for rooted and unrooted trees
barneyhill/HyperTS
Hyperbolic Tree Sequence Inference
barneyhill/NeuroSEED
Implementation of Neural Distance Embeddings for Biological Sequences (NeuroSEED) in PyTorch (NeurIPS 2021)
barneyhill/nts-scrape
barneyhill/ols
barneyhill/open-musiclm
Implementation of MusicLM, a new text to music model published by Google, with a few modifications.
barneyhill/phasedibd
Identity-by-descent inference using the templated positional Burrows-Wheeler transform (TPBWT)
barneyhill/poe
barneyhill/SAIGE
Development for SAIGE and SAIGE-GENE(+)
barneyhill/saige_group
barneyhill/slurm-ray
barneyhill/SpliceAI
A deep learning-based tool to identify splice variants
barneyhill/tsdate
Infer the age of ancestral nodes in a tree sequence.
barneyhill/tsinfer-snakemake
barneyhill/vcfstats
barneyhill/wikicrow_embeddings
barneyhill/www
personal site