Pinned Repositories
astrovim-config
barsite
personal website
bcftools
This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html
bioscripts
Collection of tiny scripts for various bioinformatics stuff
BioShell
Shell scripts for biology
cross-symbol-checker
Cross check RefSeq and Ensembl annotation sources for HGNC Symbols
dove
DOwnstream Vcf Evaluation
molbiokon19
poster
pigeon
PIpelining GEnomic operatiONs
pyfq
Fastq manipulations and quality check
barslmn's Repositories
barslmn/astrovim-config
barslmn/barsite
personal website
barslmn/bcftools
This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html
barslmn/bioscripts
Collection of tiny scripts for various bioinformatics stuff
barslmn/ceph-dnm-manuscript
Code used for figure generation and statistical analysis for https://elifesciences.org/articles/46922
barslmn/cross-symbol-checker
Cross check RefSeq and Ensembl annotation sources for HGNC Symbols
barslmn/st
suckless simple terminal fork
barslmn/chords
helper for finding chords
barslmn/ClassifyCNV
ClassifyCNV: a tool for clinical annotation of copy-number variants
barslmn/commentoplusplus
barslmn/compbiostuff
barslmn/dotfiles
dotfiles
barslmn/evidence_beds
barslmn/hgnc-data
hgnc data archive from their ftp
barslmn/linkageplot
plot result of easy linkage
barslmn/ngsoneliner
barslmn/ngsslides
barslmn/omicssbs
barslmn/org-roam-ui
A graphical frontend for exploring your org-roam Zettelkasten
barslmn/picus
Pointed Interpretation of Clinical Variant Significance
barslmn/sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
barslmn/sci-pub
Federated scientific paper publishing framework
barslmn/seqr
web-based analysis tool for rare disease genomics
barslmn/seqr-loading-pipelines
hail-based pipelines for annotating variant callsets and exporting them to elasticsearch
barslmn/seqr-reporting
Reporting module for seqr
barslmn/sn
simple note taking with dmenu and cron reminders.
barslmn/variantversioncontrol
barslmn/vcf2tsv
Awk script for parsing vcf
barslmn/vesta
tool for pedigree
barslmn/XhetRel
X heterozygosity and relatedness analysis from VCF files