== PREPROCESS == run with queallAfni_restproc.bash - runs qsub_afni_restproc.bash via qsub/torque can be run for an individual without batch processing: see qsub_afni_restproc.bash -h TO MODIFY: you will likely want to change the afni_restproc.py settings (in qsub_afni_restproc.bash) 1. change innerdir value 2. copy afni_proc and add innerdir case statement 3. change parts of afni_restproc (e.g. add gsr, add physio) 4. add and commit your chages -- this stops us from having so many scripts (e.g. rest_preproc_v6_redo_SM) -- and makes all changes trackabe in git NOTES: * inspecting $(which afni_restproc.py) shows AFNI always uses TT_N27+tlrc, avg of 27 Collin brains == DATA == transfer from wallace, see 99_transferProcessed.bash == PREPROC ANALYSIS == e.g. how many subjects, who generate data summary (e.g. txt/SubjectTimeAgeSexFD.txt) with analysis/numVolFDthres.bash