/peanut

Primary LanguagePython

peanut

Requires: scikit-bio https://github.com/biocore/scikit-bio

Little tools for converting from a DNA / RNA sequence to amino acid sequence

Current uses:

-- Determine amino acid sequence from DNA sequencing data for single protein (saves a new file with the amino acid sequence, and also prints it out just for funsies)

-- Calculate total resultant mutant protein space from single or double nucleotide mutations

-- Calculate extinction coefficient of a protein