/Sean_Fish_Acoustics17-18

All data related to Sean's acoustics chapter of his Masters thesis

Primary LanguageHTML

Sean_Acoustics README

Project Description

The purpose of this project is to explore and find explanations for the diurnal and fish call patterns found in the sound at 5 sites at Kiritimati recorded in both 2017 and 2018.

Directory

Manuscripts

Project_Plan

R_Scripts

Raw_Data

Manuscripts

  • Methods Outline

Project_Plan

  • Analysis_Time_Worksheet.xlsx - calculating the amount of analysis needed

  • Fish_Survey_SoundSampling.xlsx - figuring out which files to sample

R_Scripts

  • Cleaning_Scripts

    • KI_fish_clean_13_15_17_18_SD

  • R_markdown

    • KI_fish_explore_box_JM.Rmd

    • KI_fish_explore_box_SD.html

    • KI_fish_explore_box_SD.Rmd

    • KI_fish_models_final_JM.Rmd

  • SD_Scripts

    • Input_R_Files

      • TMPwd R Workspace - length and weight data used for biomass - From James Robinson

    • Output_R_Files

      • KI_UVC_13_15_17_18 R workspace
      • KI_UVC_17_18 R workspace
      • KI_UVC_17_18_obs_herb_sum R workspace
      • KI_UVC_17_18_obs_sum R workspace

    • KI_fish_sum_SD[7412] R workspace

  • R workspace

  • .Rhistory

  • Sean_Acoustics R Project

Raw_Data

  • KI_fishsurvey_2018_SD.csv

  • KI_fishsurvey_2018_SF.csv

  • ki_sites_updatedMay2018_newFPressure_KLT_msc.csv

  • 2018_Kiritimati_field_data__FISH_URCHINS_HERB_OBS_SD_FINAL.xls

  • 2018_Kiritimati_field_data_FISH_URCHINS_HERB_OBS_SF_FINAL.xls

  • Deith_CRED_FG_Allocation.csv

  • KI_fishsurvey_2017_SD.csv

  • KI_fishsurvey_2017_TAP.csv

  • ki_sites_RT.csv