Pinned Repositories
ARMOR
Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data
bam-filter
A simple tool to calculate metrics from a BAM file and filter references with uneven coverages
clusterProfiler
:bar_chart: statistical analysis and visualization of functional profiles for genes and gene clusters
CoordinatedMicrobiome
Analysis for "Neonatal gut and respiratory microbiota: coordinated development through time and space"
diablo
DIABLO - an integrative multi-group, multi-dataset classification method
donor-selection
Exploring donor selection approaches for FMT trials
EdwardsLab
Code from the Edwards lab, including bioinformatics, image analysis and more. All this code is created and maintained by folks at Rob Edwards' bioinformatics lab at SDSU.
firstrepo
R_workshop
R Software Carpentry workshop
test
bcpd's Repositories
bcpd/ARMOR
Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data
bcpd/bam-filter
A simple tool to calculate metrics from a BAM file and filter references with uneven coverages
bcpd/clusterProfiler
:bar_chart: statistical analysis and visualization of functional profiles for genes and gene clusters
bcpd/CoordinatedMicrobiome
Analysis for "Neonatal gut and respiratory microbiota: coordinated development through time and space"
bcpd/diablo
DIABLO - an integrative multi-group, multi-dataset classification method
bcpd/donor-selection
Exploring donor selection approaches for FMT trials
bcpd/EdwardsLab
Code from the Edwards lab, including bioinformatics, image analysis and more. All this code is created and maintained by folks at Rob Edwards' bioinformatics lab at SDSU.
bcpd/firstrepo
bcpd/R_workshop
R Software Carpentry workshop
bcpd/test
bcpd/woltka
Web of Life Toolkit App