Pinned Repositories
bene200.github.io
My GitHub pages site
biojs-human-tissues
Simple visualisation of human tissues
biojsshiny
The BioJS widgets we integrated into Shiny at the hackathon
crispr_screen_correlation
A short analysis of the reproducibility in pooled CRISPR-Cas9 dropout screens.
dot_bracket_notation
Dot Bracket Notation repository for Protein Prediction II
drawrnajs
Draw RNA secondary structures
gscreend
Phenotype detection in pooled genetic perturbation screens
ICS
Supplementary computer code to reproduce analyses and figures in the manuscript "High speed fluorescence image-enabled cell sorting".
immersenet
Immersive visualisation of genetic interactions.
msaR
The BioJS MSA viewer wrapped into an R package
benediktrauscher's Repositories
benediktrauscher/msaR
The BioJS MSA viewer wrapped into an R package
benediktrauscher/drawrnajs
Draw RNA secondary structures
benediktrauscher/ICS
Supplementary computer code to reproduce analyses and figures in the manuscript "High speed fluorescence image-enabled cell sorting".
benediktrauscher/biojs-human-tissues
Simple visualisation of human tissues
benediktrauscher/biojsshiny
The BioJS widgets we integrated into Shiny at the hackathon
benediktrauscher/crispr_screen_correlation
A short analysis of the reproducibility in pooled CRISPR-Cas9 dropout screens.
benediktrauscher/dot_bracket_notation
Dot Bracket Notation repository for Protein Prediction II
benediktrauscher/gscreend
Phenotype detection in pooled genetic perturbation screens
benediktrauscher/immersenet
Immersive visualisation of genetic interactions.
benediktrauscher/bene200.github.io
My GitHub pages site
benediktrauscher/biojs-stringdb
Very simple module to interact with the API of the STRING databse
benediktrauscher/biojs-vapor
A BioJS usecase
benediktrauscher/biojs-xpression
Visualisation of tissue-specific gene expression data
benediktrauscher/caRpools
Exploratory data analysis for pooled CRISPR/Cas9 screens
benediktrauscher/cytoscape.js-edgehandles
Edge creation extension for Cytoscape.js
benediktrauscher/galaxyJS
A Javascript library for interacting with the Galaxy API
benediktrauscher/grnai-vis-compare
benediktrauscher/grnai-vis-phenotypes
Gene to phenotype association visualisation
benediktrauscher/homework-3
This is an exercise for Protein Prediction 2. Given live data from the site reddit, edit the function runVis() in vis.js and try to create a small visualization
benediktrauscher/lfs_test
benediktrauscher/mini-express-example
Minimal example of how to send data content from a client side file upload to a server via HTTP and save it to file.
benediktrauscher/msa
Modular BioJS compoment for a multiple sequence alignment
benediktrauscher/msa-tree
A modular combination of MSA viewer and phylogenetic tree viewer
benediktrauscher/PrimerMap
loads a sequence:primer map
benediktrauscher/quickblast
Leightweight Javascript interface for the EMBL-EBI BLAST URL API
benediktrauscher/registry-ui
The BioJS registry frontend
benediktrauscher/vapor-backend
Backend of VAPoR
benediktrauscher/vapor-frontend
Frontend of VAPoR