Pinned Repositories
checkmyclones
python library for verification of molecular clones by Sanger sequencing
COSMOS2
Python Scientific Pipeline Management System
dotfiles
Terminal Settings (for OSX)
facebookdata
Python module for parsing exported facebook data
MACS
MACS -- Model-based Analysis of ChIP-Seq
samtools
This is *NOT* the official repository of samtools. This repository is intended to maintain Windows / MSVC support in samtools for pysam
scripter
Intended for automation of tasks on multicore computers
seriesoftubes
An extended pipeline for Solexa ChIP-seq data
tabix
This is *not* the official repository ; this fork is intended to maintain Windows support for tabix (currently via mingw or psyam)
twobitreader
A fast python class for reading 2-bit files (used by UCSC genome browser)
benjschiller's Repositories
benjschiller/twobitreader
A fast python class for reading 2-bit files (used by UCSC genome browser)
benjschiller/seriesoftubes
An extended pipeline for Solexa ChIP-seq data
benjschiller/checkmyclones
python library for verification of molecular clones by Sanger sequencing
benjschiller/tabix
This is *not* the official repository ; this fork is intended to maintain Windows support for tabix (currently via mingw or psyam)
benjschiller/facebookdata
Python module for parsing exported facebook data
benjschiller/MACS
MACS -- Model-based Analysis of ChIP-Seq
benjschiller/samtools
This is *NOT* the official repository of samtools. This repository is intended to maintain Windows / MSVC support in samtools for pysam
benjschiller/scripter
Intended for automation of tasks on multicore computers
benjschiller/COSMOS2
Python Scientific Pipeline Management System
benjschiller/dotfiles
Terminal Settings (for OSX)
benjschiller/dotvim
All my vim configuration files.
benjschiller/intervaltree
A mutable, self-balancing interval tree. Queries may be by point, by range overlap, or by range containment.
benjschiller/pandas
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
benjschiller/plasmidsaurus
plasmidsaurus bacterial genome assembly and annotation snakemake pipeline
benjschiller/sphinx-minimal
Modified LaTeX style for Sphinx documentation, compatible with report / UC Thesis