Pinned Repositories
artificial-intelligence-ontology
An ontology modeling classes and relationships describing deep learning networks, their component layers and activation functions, machine learning methods, as well as AI/ML potential biases.
bbop-graph
General purpose (mathematical) graph library in JavaScript.
bbop-js
Cross-platform client and server JavaScript library, with a concentration on Solr, graphs, utilities, and convenience methods.
bbop-layout
A collection of external and in-house layout engines producing an abstract common output for JavaScript graphs.
bbop-rest-manager
The is the "new" version of the manager event model for BBOP systems.
berkeleybop.github.io
Homepages for the Berkeley BOP.
bero
Biological and Environmental Research Ontology (BERO)
jbrowse
AJAX Genome Browser
kgviz-model
Schema for configurations / stylesheets for visualizing ontology and KGs
lsi.sh
MegaCLI script to configure and monitor LSI raid cards.
Berkeley BOP's Repositories
berkeleybop/lsi.sh
MegaCLI script to configure and monitor LSI raid cards.
berkeleybop/artificial-intelligence-ontology
An ontology modeling classes and relationships describing deep learning networks, their component layers and activation functions, machine learning methods, as well as AI/ML potential biases.
berkeleybop/berkeleybop.github.io
Homepages for the Berkeley BOP.
berkeleybop/kgviz-model
Schema for configurations / stylesheets for visualizing ontology and KGs
berkeleybop/bbop-graph
General purpose (mathematical) graph library in JavaScript.
berkeleybop/bbop-layout
A collection of external and in-house layout engines producing an abstract common output for JavaScript graphs.
berkeleybop/bbop-rest-manager
The is the "new" version of the manager event model for BBOP systems.
berkeleybop/bero
Biological and Environmental Research Ontology (BERO)
berkeleybop/.github
berkeleybop/apollo-log-scraper
berkeleybop/bbop-client-barista
Manager for handling per-model client-to-client and server-to-client communication via Barista.
berkeleybop/bbop-core
A set of useful and common JavaScript functions to supplement other more basic utility libraries.
berkeleybop/bbop-graph-noctua
A subclass of bbop-graph that layers on a complete annotation and graph editing model for the Noctua set of tools.
berkeleybop/bbop-manager-golr
Manager for handling communication and callbacks with GOlr instances.
berkeleybop/bbop-manager-minerva
Manager for handling communication and callbacks with Minerva instances (mediated by Barista).
berkeleybop/bbop-manager-sparql
Manager for handling communication and callbacks with a SPARQL endpoint; also allows for use of templates.
berkeleybop/bbop-registry
Generic lightweight listener/callback registry system.
berkeleybop/bbop-response-barista
Response handler for dealing with the parsing of responses from Barista (enveloping Minerva).
berkeleybop/bbop-response-golr
Response type and API for handling the returns from a GOlr instance in a standard way.
berkeleybop/bbop-rest-response
Generic handler for dealing with the gross parsing and handling of responses from a REST service.
berkeleybop/bbop-widget-set
The set package for commpnly used BBOP widgets. This replaces the widgets from the old monolithic bundle.
berkeleybop/bbopx-js
Experimental and in-development libraries for BBOP JS (bbop-js).
berkeleybop/berkeleybop
Generic repo for BBOP.
berkeleybop/class-expression
A handling library for OWL-style class expressions in JavaScript.
berkeleybop/galaxy-monarch-curl
berkeleybop/golr-conf
GOlr configuration file handling and API.
berkeleybop/golr-numbers-service
A service API and minimal webapp for accessing bulk numbers and calculations from a GOlr backend.
berkeleybop/golr-schema
Utility to generate a schema.xml from a yaml config file.
berkeleybop/minerva-requests
JavaScript library for generating request information for interactions with a Minerva server.
berkeleybop/obo-models
Models for the "generic" Noctua.