Pinned Repositories
bayeshack_viirs_census
Exploring VIIRS Satellite and US Census Data
bernaljg.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
biobert
BioBERT: a pre-trained biomedical language representation model
clinicalBERT
repository for Publicly Available Clinical BERT Embeddings
covid19-classification
Testing Document Classification on COVID-19 Literature using the LitCovid dataset and the Hedwig library.
disorder-normalizer
A system for normalizing disorder mentions in biomedical data.
DomainSpecificLMs
A compilation of papers related to domain specific language model training and evaluation. We focus on language models trained for biomedicine, finance, law, education, etc.
drugbank
User-friendly extensions of the DrugBank database
few-shot-bioIE-update
True Few-Shot BioIE: Benchmarking GPT-3 In-Context and Small PLM Fine-Tuning
mspacman
Deep Reinforcement Agent for playing MsPacman
bernaljg's Repositories
bernaljg/DomainSpecificLMs
A compilation of papers related to domain specific language model training and evaluation. We focus on language models trained for biomedicine, finance, law, education, etc.
bernaljg/covid19-classification
Testing Document Classification on COVID-19 Literature using the LitCovid dataset and the Hedwig library.
bernaljg/HippoRAG
HippoRAG is a novel RAG framework inspired by human long-term memory that enables LLMs to continuously integrate knowledge across external documents. RAG + Knowledge Graphs + Personalized PageRank.
bernaljg/mspacman
Deep Reinforcement Agent for playing MsPacman
bernaljg/bayeshack_viirs_census
Exploring VIIRS Satellite and US Census Data
bernaljg/bernaljg.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
bernaljg/biobert
BioBERT: a pre-trained biomedical language representation model
bernaljg/clinicalBERT
repository for Publicly Available Clinical BERT Embeddings
bernaljg/disorder-normalizer
A system for normalizing disorder mentions in biomedical data.
bernaljg/drugbank
User-friendly extensions of the DrugBank database
bernaljg/few-shot-bioIE-update
True Few-Shot BioIE: Benchmarking GPT-3 In-Context and Small PLM Fine-Tuning
bernaljg/flood_object_rec
Scripts to find common objects in photographs taken from MyCoast flooding database
bernaljg/Hierarchical-Typing
Code and Data for all experiments from our ACL 2018 paper "Hierarchical Losses and New Resources for Fine-grained Entity Typing and Linking"
bernaljg/img-reg
Produces stabilized movies for neuromuscular junctions from drosophila calcium imaging movies
bernaljg/img-reg-cluster
Version of image registration program that uses SLURM Scheduler to achieve parallelization
bernaljg/jointRN
bernaljg/N-aryRels
5539 N-ary Scientific Relation Extraction Project
bernaljg/rw_uva
Real-World Evaluation of UMLS Vocabulary Alignment Systems
bernaljg/SeeAct
SeeAct is a system for generalist web agents that autonomously carry out tasks on any given website, with a focus on large multimodal models (LMMs) such as GPT-4V(ision).
bernaljg/TextING
Tensorflow implementation of ACL2020 paper "Every Document Owns Its Structure: Inductive Text Classification via Graph Neural Networks."
bernaljg/transformers
🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.