Pinned Repositories
datasciencecoursera
Repo for Data Science Course
datasharing
The Leek group guide to data sharing
ExData_Plotting1
Plotting Assignment 1 for Exploratory Data Analysis
GetAndCleanData
ProgrammingAssignment2
Repository for Programming Assignment 2 for R Programming on Coursera
docker-BWA-MEM2
Docker repository for BWA-MEM2 and SAMtools
docker-HISAT2
Docker repository for HISAT2 algorithm
docker-Picard
Docker repository for Picard
pipeline-align-DNA
Nextflow pipeline to align paired DNA FASTQs and sort, mark duplicates, and index resulting alignment
pipeline-call-sSNV
Nextflow pipeline to identify the somatic single nucleotide variants (sSNVs) by comparing a pair of tumor/normal samples.
bethneilsen's Repositories
bethneilsen/datasciencecoursera
Repo for Data Science Course
bethneilsen/datasharing
The Leek group guide to data sharing
bethneilsen/ExData_Plotting1
Plotting Assignment 1 for Exploratory Data Analysis
bethneilsen/GetAndCleanData
bethneilsen/ProgrammingAssignment2
Repository for Programming Assignment 2 for R Programming on Coursera