Pinned Repositories
ClassificationComparison
Biotope classfication comparison work for TWINSPAN - uses the same dataset as others using different methods (kmeans, clusterSimper,gradient forests, regions of common profile) will each run a biotope classifcation and then compare the outcomes.
Baco-et-al-Anova-plots
R scripts associated with Baco et al "Towards a Scientific Community Consensus on Designating Vulnerable Marine Ecosystems from Imagery"
biotopes
Developing a script to classify biotopes from the whole MAREANO dataset using TWINSPAN in R. My try another method in due course but need to test if the current method is adequately scalable when done in R.
biotopes2023
Adaptation of 2021/2022 work "biotopes", includes clean up of file structure, new save locations, new input locations etc
connectivity-modeling-system
The CMS is a multiscale stochastic Lagrangian framework developed by Paris' Lab at the Rosenstiel School of Marine & Atmospheric Science to study complex migrations and give probability estimates of dispersion, connectivity, fate of pollutants, and other Lagrangian phenomena. This repository facilitates community contributions to CMS modules.
deepsea
Analyses and explorations of the norwegian deep sea area (prior to Mareano GBK, post MBE)
deepseaNiN
Ingests outputs from videoDataPrep and applies Natur i Norge methods to develop deep sea NiN nature types for NiN v 3
MSmareanoNiN
Code associated with analyses for the Ross et al article on mareano's applicaiton of the EcoSys framework to discern biogeographic and species-environment relationships in aphotic norwegian waters
PerdctorPrep
for prepping predictors for use in modelling, any scripts that help with this process
test
I reckon you can work out what this is for ;)
bexeross's Repositories
bexeross/deepsea
Analyses and explorations of the norwegian deep sea area (prior to Mareano GBK, post MBE)
bexeross/MSmareanoNiN
Code associated with analyses for the Ross et al article on mareano's applicaiton of the EcoSys framework to discern biogeographic and species-environment relationships in aphotic norwegian waters
bexeross/deepseaNiN
Ingests outputs from videoDataPrep and applies Natur i Norge methods to develop deep sea NiN nature types for NiN v 3
bexeross/ClassificationComparison
Biotope classfication comparison work for TWINSPAN - uses the same dataset as others using different methods (kmeans, clusterSimper,gradient forests, regions of common profile) will each run a biotope classifcation and then compare the outcomes.
bexeross/PerdctorPrep
for prepping predictors for use in modelling, any scripts that help with this process
bexeross/biotopes2023
Adaptation of 2021/2022 work "biotopes", includes clean up of file structure, new save locations, new input locations etc
bexeross/Baco-et-al-Anova-plots
R scripts associated with Baco et al "Towards a Scientific Community Consensus on Designating Vulnerable Marine Ecosystems from Imagery"
bexeross/videoEnvDataPrep
Ingests MAREANO MarVid data and applies rStation, sample and species filters to output data suitable for NiN/ twinspan classification analyses
bexeross/biotopes
Developing a script to classify biotopes from the whole MAREANO dataset using TWINSPAN in R. My try another method in due course but need to test if the current method is adequately scalable when done in R.
bexeross/test
I reckon you can work out what this is for ;)
bexeross/connectivity-modeling-system
The CMS is a multiscale stochastic Lagrangian framework developed by Paris' Lab at the Rosenstiel School of Marine & Atmospheric Science to study complex migrations and give probability estimates of dispersion, connectivity, fate of pollutants, and other Lagrangian phenomena. This repository facilitates community contributions to CMS modules.