/WhiptailProject

Github repository for the Population divergence in gene expression in an asexual lizard species.

Primary LanguageR

pop-divergence-func-gen

In this repository, we are analyzing RNA-seq data collected from three different populations of A. tesselata. This pipeline was created in collaboration with Dr. Randy Klabacka by Akila Abesinghe, Ally Swank, Gabriel Amorim de Albuquerque Silva, and Melissa Gathman.

Directory Summary:

  • CorePipeline_WhiptailProject: Bionformatics portion of our project
  • DESeq2_WhiptailProject: All statistical code and data visualization
  • WGCNA_WhiptailProject: Ally Swank's individual component