bienseo

bienseo's Stars

• mlpc-ucsd/BDM

  (CVPR 2024) Bayesian Diffusion Models for 3D Shape Reconstruction

  Language:Python223

• DmitryUlyanov/deep-image-prior

  Image restoration with neural networks but without learning.

  Language:Jupyter Notebook7.9k1.4k

• Waller-Lab/DPC_withAberrationCorrection

  M. Chen, Z. F. Phillips, and L. Waller, Quantitative differential phase contrast (DPC) microscopy with computational aberration correction, Opt. Express 26(25), 32888-32899 (2018).

  Language:Jupyter Notebook2811

• Waller-Lab/DiffuserCam

  DiffuserCam Processing Code

  Language:Matlab11530

• freemercury/Aberration_correction_metasensor

  Language:MATLAB427

• altmany/export_fig

  A MATLAB toolbox for exporting publication quality figures

  Language:MATLAB1.3k367

• graphdeco-inria/gaussian-splatting

  Original reference implementation of "3D Gaussian Splatting for Real-Time Radiance Field Rendering"

  Language:Python14.3k1.9k

• sakoho81/miplib

  A Python software library with a variety of functions for (optical) microscopy image restoration, reconstruction and analysis.

  Language:Jupyter Notebook7124

• HeSunPU/DPI

  Deep Probabilistic Imaging (DPI): Uncertainty Quantification and Multi-modal Solution Characterization for Computational Imaging

  Language:Jupyter Notebook338

• ries-lab/uiPSF

  Language:Python272

• phamduonghung/BD-RPCA

  Joint Blind Deconvolution and Robust Principal Component Analysis for Blood Flow Estimation in Medical Ultrasound Imaging

  Language:MATLAB157

• matlab-deep-learning/nerf

  NeRF - Neural Radiance Fileds in MATLAB

  Language:MATLAB91

• HelmchenLabSoftware/Cascade

  Calibrated inference of spiking from calcium ΔF/F data using deep networks

  Language:Jupyter Notebook11932

• vpronina/DeepWienerRestoration

  Language:Jupyter Notebook113

• Thorlabs/Light_Analysis_Examples

  Software examples for Thorlabs products: Spectrometers CCSxxx | Polarimeter PAX1000 | Power Meter PMxxx | Optical Spectrum Analyzers OSA | Shack-Hartmann Wavefront Sensors WFSxx | CMOS Camera Beam Profiler BC207

  Language:HTML2115

• iksungk/CoCoA

  Kang, I., Zhang, Q., Yu, S.X. et al. Coordinate-based neural representations for computational adaptive optics in widefield microscopy. Nat Mach Intell 6, 714–725 (2024). https://doi.org/10.1038/s42256-024-00853-3

  Language:Jupyter Notebook103

• berthyf96/score_prior

  Score-Based Priors for Bayesian Inverse Imaging

  Language:Python305

• QI2lab/OPM

  Control, reconstruction, and analysis code for oblique plane microscopy.

  Language:Python217

• JinghaoLu/MIN1PIPE

  A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.

  Language:MATLAB5927

• apsk14/rdmpy

  Official implementation of Ring Deconvolution Microscopy from https://arxiv.org/abs/2206.08928

  Language:Jupyter Notebook306

• mpriessner/CAFI

  Combined Repos from DAIN and Zooming SlowMo

  Language:Python195

• remachae/beamsimulator

  Language:MATLAB92

• bahanonu/imaging_tools

  A table containing imaging analysis tools for biology, with a focus on calcium imaging.

  433

• hkaggarwal/modl

  MoDL: Model-Based Deep Learning Architecture for Inverse Problems

  Language:Python16853

• bowang-lab/MedSAM

  Segment Anything in Medical Images

  Language:Jupyter Notebook2.9k404

• AllenNeuralDynamics/exa-spim-hardware

  5

• facebookresearch/segment-anything

  The repository provides code for running inference with the SegmentAnything Model (SAM), links for downloading the trained model checkpoints, and example notebooks that show how to use the model.

  Language:Jupyter Notebook47.3k5.6k

• milesial/Pytorch-UNet

  PyTorch implementation of the U-Net for image semantic segmentation with high quality images

  Language:Python9.2k2.5k

• wustl-cig/DeCAF

  Language:Python465

• rosalindfranklininstitute/RedLionfish

  Language:Jupyter Notebook294