bifidotftw

Pinned Repositories

HMDB2excel
Parse HMDB XML file and write information to excel sheets
Language:Python00
limma_example
Simple script to calculate logFC, pval and adjpval for two groups.
Language:Jupyter Notebook00
metsim
A simple way to simulate the distribution of 13C in metabolic pathways.
Language:Python00
script_archive
Script archive
Language:Jupyter Notebook00
splashRNA_webscraper
Downloads result csv file from http://splashrna.mskcc.org/ for a list of entrezIDs
Language:Python01
untargeted_maven2metaboanalyst
Language:R00
ElMaven
LC-MS data processing tool for large-scale metabolomics experiments.
Language:C++88 15 67452
enrichment_fitting
Script for fitting a negative exponential function to 13C labeling data.
Language:Jupyter Notebook00
growth_curve
Short script to calculate the cumulative cell number and doubling time for a growth curve
Language:Jupyter Notebook00
obsidian-tasks
Task management for the Obsidian knowledge base.
Language:TypeScript2.6k 20 1.1k237

bifidotftw's Repositories

bifidotftw/HMDB2excel
Parse HMDB XML file and write information to excel sheets
Language:Python00
bifidotftw/limma_example
Simple script to calculate logFC, pval and adjpval for two groups.
Language:Jupyter Notebook00
bifidotftw/metsim
A simple way to simulate the distribution of 13C in metabolic pathways.
Language:Python00
bifidotftw/script_archive
Script archive
Language:Jupyter Notebook00
bifidotftw/splashRNA_webscraper
Downloads result csv file from http://splashrna.mskcc.org/ for a list of entrezIDs
Language:Python01
bifidotftw/untargeted_maven2metaboanalyst
Language:R00