biflorenzi/Metabolic_modeling
In this repository the metabolic model of F. prausnitzii generated by Heinken, et al 2014 (“Functional metabolic map of Faecalibacterium prausnitzii, a beneficial human gut microbe.”, https://doi.org/10.1128/JB.01780-14) was validated with in-vitro growth data. 3 python jupyter notebooks, one for each medium, and a R jupyter notebook contain the main analysis of this project.
Jupyter Notebook
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