BioFormats bridge relative file paths
Closed this issue · 4 comments
martinschorb commented
Hi,
I want to use the BioFormats bridge to BDV to import a simple single image.
The file is listed in:
<opener_0>{"dataLocation":"...
However the location is an absolute file path. It seems relative paths are not supported directly in this format. However, if I want to share the data or open it from a different machine, it fails.
Would it be possible to enable a relative path to a file to open using the BioFormats bridge?
NicoKiaru commented
Ah, that's complicated. Even in QuPath they dropped the support for relative file path.
Have you tried to put a relative manually ? Does it work like this ?
martinschorb commented
Have you tried to put a relative manually ?
It fails to find the file.
NicoKiaru commented
ok
NicoKiaru commented
This would need to be discussed in bigdataviewer-bioformats.
Honestly I don't have time to work on it.