martinschorb
I am developing solutions to make computational tools such as HPC accessible to scientists of any kind.
Germany
Pinned Repositories
dask-image
Distributed image processing
cluster_tools
Distributed segmentation for bio-image-analysis
clusterscripts
cookiecutter-napari-plugin
Cookiecutter for napari plugins
dask-image
Distributed image processing
elf
Utils and convenience functions for large-scale bio-image analysis.
pyem
Python package to interact with SerialEM to automate Transmission Electron Microscopy
volumealign
WebUI for the Render Alignment Pipeline on the HPC cluster
mobie-napari-bridge
A napari plugin to interact with MoBIE projects
mobie-utils-python
Python tools for MoBIE
martinschorb's Repositories
martinschorb/render
Render transformed image tiles
martinschorb/render-modules
Shared repo for EM connectomics and Array Tomography render based image processing modules
martinschorb/render-python
A python interface for render
martinschorb/render-python-apps
martinschorb/XIMG-EMBL
Tools for image processing and phase-contrast X-ray tomography from M.Polikarpov
martinschorb/cluster_tools
Distributed segmentation for bio-image-analysis
martinschorb/clusterscripts
martinschorb/cookiecutter-napari-plugin
Cookiecutter for napari plugins
martinschorb/dask-image
Distributed image processing
martinschorb/elf
Utils and convenience functions for large-scale bio-image analysis.
martinschorb/Mat-O-Wahl
:de: Mat-O-Wahl - Ein einfach zu bedienender, freier Open Source Wahl-O-Mat Klon fuer jedermann ### :gb: :us: A simple to handle, free "Voting Advice Application" / "Electoral Compass" alternative
martinschorb/membranedist
Calculation of membrane distance in cryo-EM microgaphs of bacteria
martinschorb/mobie-utils-python
Python tools for MoBIE
martinschorb/mobie-viewer-fiji
martinschorb/mobie.github.io
martinschorb/platybrowser-project
martinschorb/pybdv
python tools for BigDataViewer
martinschorb/pyem
Python package to interact with SerialEM to automate Transmission Electron Microscopy
martinschorb/volumealign
WebUI for the Render Alignment Pipeline on the HPC cluster
martinschorb/martinschorb
martinschorb/MATLAB_CLEM
martinschorb/mobie_import
martinschorb/relion
Image-processing software for cryo-electron microscopy
martinschorb/rendermodules-addons