billzt

Bioinformatics

Japan

Pinned Repositories

1000g-haploid
Fetch haploids from 1000 genome data
0 2 00
Chloroplot
A R tool to parse and visualize mitochondrial genomes
Language:R0 1 00
endnote.js
Insert literature citation into HTML and then render as Endnote-style citation
Language:HTML2 2 00
gff3sort
GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools
Language:Perl47 5 1419
MiFish
This is the command line version of MiFish pipeline. It can also be used with any other eDNA meta-barcoding primers
Language:Python16 2 143
MultiBarcodePipeline
Calculate optimal combination of eDNA barcodes based on amplicon sequences
Language:Python3 1 10
PrimerServer
Obsolete!! Begin to turn to PrimerServer2
Language:Perl10 2 382
PrimerServer2
PrimerServer2: a high-throughput primer design and specificity-checking platform
Language:Python77 6 1414
pyOverChain
a python pipeline to generate chain files between different genome assemblies for LiftOver.
Language:Python6 2 12
readfq
A simple tool to calculate reads number and total base count in FASTQ file
Language:C20 2 07

billzt/PrimerServer2
PrimerServer2: a high-throughput primer design and specificity-checking platform
Language:Python77 6 1414
billzt/gff3sort
GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools
Language:Perl47 5 1419
billzt/readfq
A simple tool to calculate reads number and total base count in FASTQ file
Language:C20 2 07
billzt/MiFish
This is the command line version of MiFish pipeline. It can also be used with any other eDNA meta-barcoding primers
Language:Python16 2 143
billzt/PrimerServer
Obsolete!! Begin to turn to PrimerServer2
Language:Perl10 2 382
billzt/pyOverChain
a python pipeline to generate chain files between different genome assemblies for LiftOver.
Language:Python6 2 12
billzt/MultiBarcodePipeline
Calculate optimal combination of eDNA barcodes based on amplicon sequences
Language:Python3 1 10
billzt/endnote.js
Insert literature citation into HTML and then render as Endnote-style citation
Language:HTML2 2 00
billzt/1000g-haploid
Fetch haploids from 1000 genome data
0 2 00
billzt/Chloroplot
A R tool to parse and visualize mitochondrial genomes
Language:R0 1 00
billzt/figure
0 2 00
billzt/OligoDimer
Detecting dimers among multiple oligo sequences
Language:JavaScript2 0
billzt/WoLFPSort
WoLFPSort v0.2 source code as original server no longer available
Language:HTML2 0
billzt/word-dictation
A word or sentence dictation script based on MacOS
Language:Python2 0