binarybottle
I build mobile health technologies to study mental illness and offer potential interventions. Public projects: https://osf.io/v9wn5/
Child Mind InstituteNew York, NY
Pinned Repositories
braincolor
brainCOLOR project: brain image labeling protocol and optimal colormap designed for brain images
braincolor-roygbiv
Volume brain image viewer for use with braincolor data (code without original data)
concurrencetopology
"Concurrence topology" is a method for describing high-order statistical dependence among binary variables
elloracaves.org
elloracaves.org website (code)
engram
Arno's Engram v2.0 ("Engram") layout is an optimized key layout for touch typing in English based on ergonomic considerations, with a protocol and software for creating new, optimized key layouts in other languages.
engram-es
Arno's Spanish Engram layout is an optimized key layout for touch typing in Spanish based on ergonomic considerations, with a protocol and software for creating new, optimized key layouts in other languages.
homology
Topological analysis of brain activity data
mindboggle_sidelined
Scripts used in the development of Mindboggle, but not in the mindboggle repository
roygbiv
Roy G. Brain Image Viewer for browser-based visualization of Mindboggle cortical surface label/shape data
text_data
Text data
binarybottle's Repositories
binarybottle/engram
Arno's Engram v2.0 ("Engram") layout is an optimized key layout for touch typing in English based on ergonomic considerations, with a protocol and software for creating new, optimized key layouts in other languages.
binarybottle/engram-es
Arno's Spanish Engram layout is an optimized key layout for touch typing in Spanish based on ergonomic considerations, with a protocol and software for creating new, optimized key layouts in other languages.
binarybottle/braincolor
brainCOLOR project: brain image labeling protocol and optimal colormap designed for brain images
binarybottle/roygbiv
Roy G. Brain Image Viewer for browser-based visualization of Mindboggle cortical surface label/shape data
binarybottle/homology
Topological analysis of brain activity data
binarybottle/concurrencetopology
"Concurrence topology" is a method for describing high-order statistical dependence among binary variables
binarybottle/mindboggle_sidelined
Scripts used in the development of Mindboggle, but not in the mindboggle repository
binarybottle/text_data
Text data
binarybottle/braincolor-roygbiv
Volume brain image viewer for use with braincolor data (code without original data)
binarybottle/elloracaves.org
elloracaves.org website (code)
binarybottle/face_timelapse
Extract facial features from ordered photographs and align faces by their pupils.
binarybottle/surface_travel_depth
Joachim Giard's Travel Depth algorithm for assigning depth to surface mesh vertices -- updated in nipy/mindboggle Github repository
binarybottle/Adv360-Pro-ZMK
Production repository for the all-new Advantage360 Professional using ZMK engine
binarybottle/arno_utils
Basic utilities I use
binarybottle/beebrains
Process bee brain images
binarybottle/binarybottle.github.io
Personal website: binarybottle.com
binarybottle/culturalentomology.org
Cultural entomology website plus database code
binarybottle/face_features
Extract 68 landmarks from a facial image (python, using opencv and clandmark).
binarybottle/jspsych-keypair-typing-task
A web-based key pair typing task in jspsych
binarybottle/lingualearn_sounds
LinguaLearn sounds provides real-time visual feedback to train pronunciation.
binarybottle/linguamorph
binarybottle/nestedsulcusfeatures_HBM2011
Automated extraction of nested sulcal features from human brain MRI data (HBM 2011 poster)
binarybottle/python-project-template
A template repository for Python projects
binarybottle/quotes_over_time
Quotes over Time tracks the top-quoted people from Reuters Alertnet News on a range of topics, and presents their quotes on a timeline (from http://www.binarybottle.com/qovert/about.php).
binarybottle/readfine
Computer-assisted generation of hyperlegible fonts.
binarybottle/typing-data
Data about computer keyboard key locations, key pair typing behaviors, etc.
binarybottle/typing-flowmap
Typing flowmap.gl in pure js
binarybottle/typing-sensors