GUODA

Pinned Repositories

guoda-datasets
Scripts and workflows for obtaining and formating datasets from external projects for use in GUODA
Language:Jupyter Notebook6 10 130
guoda-examples
Examples for using GUODA
Language:Jupyter Notebook1 7 00
guoda-services
Services provided by GUODA, currently a container for tickets and wikis.
2 7 830
preston
a biodiversity dataset tracker
Language:Java24 7 2891
preston-amazon
a biodiversity dataset graph created with Preston
00
preston-brit-2022
experimental image corpus for BRIT
Language:Shell2 5 40
preston-identifier-registry
A registry of identifier patterns
Language:Shell1 6 30
preston-sernec
Prototype to help track records and other content associated with South East Regional Network of Expertise and Collections (SERNEC) Thematic Collection Network (TCN), a collaboration that is digitizing and making data accessible for over 3 million plant specimens.
Language:Shell0 4 10
preston-service
Navigate and access biodiversity datasets in the content universe
Language:HTML0 6 01
preston-specimen-images
Keeps a longitudinal record of specimen image URLs as registered via networks like GBIF, OBIS, and iDigBio
Language:Shell0 5 00

GUODA's Repositories

bio-guoda/preston
a biodiversity dataset tracker
Language:Java24 7 2891
bio-guoda/guoda-datasets
Scripts and workflows for obtaining and formating datasets from external projects for use in GUODA
Language:Jupyter Notebook6 10 130
bio-guoda/guoda-services
Services provided by GUODA, currently a container for tickets and wikis.
2 7 830
bio-guoda/preston-brit-2022
experimental image corpus for BRIT
Language:Shell2 5 40
bio-guoda/guoda-examples
Examples for using GUODA
Language:Jupyter Notebook1 7 00
bio-guoda/preston-identifier-registry
A registry of identifier patterns
Language:Shell1 6 30
bio-guoda/bio-guoda.github.io
Language:HTML0 6 10
bio-guoda/effechecka
create taxonomic checklists and monitor biodiversity data access
Language:Scala0 4 00
bio-guoda/preston-amazon
a biodiversity dataset graph created with Preston
00
bio-guoda/preston-gnverifier
corpus tracking taxonomic name sources of https://verifier.globalnames.org
Language:Shell0 4 00
bio-guoda/preston-sernec
Prototype to help track records and other content associated with South East Regional Network of Expertise and Collections (SERNEC) Thematic Collection Network (TCN), a collaboration that is digitizing and making data accessible for over 3 million plant specimens.
Language:Shell0 4 10
bio-guoda/preston-service
Navigate and access biodiversity datasets in the content universe
Language:HTML0 6 01
bio-guoda/preston-specimen-images
Keeps a longitudinal record of specimen image URLs as registered via networks like GBIF, OBIS, and iDigBio
Language:Shell0 5 00
bio-guoda/content-concat
javascript library to retrieve content by their content hash
Language:JavaScript4 0
bio-guoda/gouda-harvester
Language:Python5 0
bio-guoda/guoda-dataflows
Code to transfer datasets and products around
Language:Shell4 0
bio-guoda/guoda-jupyterhub-config
Config and install docs for jupyterhub server
Language:JavaScript5 0
bio-guoda/hdfs-ceph-client
A client for uploading files from GUODA HDFS to iDigBio's Ceph storage.
Language:Python5 11
bio-guoda/idigbio-spark
processing engine for biodiversity archives
Language:Scala5 61
bio-guoda/preston-dbg-2022
preston archive with hashes of images associated with Denver Botanical Gardens
Language:Shell4 2
bio-guoda/preston-dillen-2018
Preston configuration to keep track of Dillen Mathias. (2018). A benchmark dataset of herbarium specimen images with label data: Summary [Data set]. Zenodo. https://doi.org/10.5281/zenodo.6372393
Language:Shell
bio-guoda/preston-index-generium
tracks assets related to https://archive.org/details/IndexGenerium Special Index to Species by Public Resource
Language:Shell4 0
bio-guoda/preston-query
Executes SPARQL queries on signed knowledge graphs
Language:TeX4 1
bio-guoda/preston-scripts
import and conversion scripts related to Preston data
Language:Shell3 0