Due Friday, July 30, 2021, 5:00 PM PDT.
Due on Monday, August 2, 2021, 10:00 AM PDT.
Due on Friday, August 13, 2021, 11:59 PM PDT.
Script to demultiplex 52 FASTQ files that contain biological reads with incorrect indexes or unmatched/low-quality-score indexes. This algorithm figures out which reads have hopped indexes and which reads have unmatched/low quality indexes, and separates these reads from the correctly-indexed reads. Each correctly-indexed read is separated into different bins/files based on their indexes.
Python
Due Friday, July 30, 2021, 5:00 PM PDT.
Due on Monday, August 2, 2021, 10:00 AM PDT.
Due on Friday, August 13, 2021, 11:59 PM PDT.