bioXiaoheng

Population geneticist developing computational methods.

University of ChicagoBoston

Pinned Repositories

BalLeRMix
Software package for BalLeRMix and scripts used in the study "Flexible mixture model approaches that accommodate footprint size variability for robust detection of balancing selection" (Cheng & DeGiorgio 2020)
Language:Python6 2 131
BallerMixPlus
This repository hosts the software package for BalLeRMix+, an extension of BalLeRMix that can jointly detect recent positive selection and long-term balancing selection.
Language:Python5 1 61
compbio-tutorial
An introduction to python and its applications to biology. Aimed at high school students
Language:Jupyter Notebook0 0 00
ds_intro_2024
Repo For 2024 OneCareer DS Intro Level
Language:HTML0 0 00
EIG
Eigen tools by Nick Patterson and Alkes Price lab
Language:C0 0 00
MuteBaSS
Software package for computing summary statistics designed for trans-species balancing selection (Cheng and DeGiorgio, 2019).
Language:Python0 1 01
ds_2024
Repo For 2024 DS Intro Level
Language:HTML831
VilgalysKlunk_yersinia_pestis
Code for Klunk, Vilgalys, et al. 2022, Nature
Language:Python8 2 02

bioXiaoheng/BalLeRMix
Software package for BalLeRMix and scripts used in the study "Flexible mixture model approaches that accommodate footprint size variability for robust detection of balancing selection" (Cheng & DeGiorgio 2020)
Language:Python6 2 131
bioXiaoheng/BallerMixPlus
This repository hosts the software package for BalLeRMix+, an extension of BalLeRMix that can jointly detect recent positive selection and long-term balancing selection.
Language:Python5 1 61
bioXiaoheng/compbio-tutorial
An introduction to python and its applications to biology. Aimed at high school students
Language:Jupyter Notebook0 0 00
bioXiaoheng/ds_intro_2024
Repo For 2024 OneCareer DS Intro Level
Language:HTML0 0 00
bioXiaoheng/EIG
Eigen tools by Nick Patterson and Alkes Price lab
Language:C0 0 00
bioXiaoheng/MuteBaSS
Software package for computing summary statistics designed for trans-species balancing selection (Cheng and DeGiorgio, 2019).
Language:Python0 1 01