biobakery/biobakery_workflows

Issues

• biobakery_workflows wmgx_vis error

  #26 opened 3 years ago by lk754673712
  3

• Error installing

  #34 opened a year ago by imonteroo
  1

• worflow issue using conda

  #33 opened 2 years ago by marcelladane
  1

• mpa_v30_CHOCOPhlAn_201901 missing (but mpa_v31_CHOCOPhlAn_201901 present instead)

  #32 opened 2 years ago by rdauria
  1

• ValueError: Unable to find binary or script `metaphlan'

  #31 opened 2 years ago by samd1993
  1

• TypeError: object of type 'dict_keyiterator' has no len()

  #29 opened 3 years ago by jowodo
  1

• nanopore reads?

  #28 opened 3 years ago by mawa86
  1

• "biobakery_workflows wmgx_vis" grouping

  #27 opened 3 years ago by lk754673712
  1

• About the parameters of kneaddata

  #8 opened 3 years ago by qiangsir
  2

• Download biobakery_workflows v3.0.0a7 and find that linux-aarch64 is not supported

  #25 opened 3 years ago by wj7643
  1

• error installing databases "no module named 'leveldb'"

  #24 opened 3 years ago by emi-panzetta
  1

• Problem with databases install

  #23 opened 3 years ago by mpozuelo
  1

• Visualization for Whole Metagenome Shotgun (wmgx_vis)

  #22 opened 3 years ago by Marcocardinphd
  1

• Humann Failed! Error message : Error executing action 0. Original Exception:

  #21 opened 3 years ago by imonteroo
  1

• Error while removing intermediate files after running biobakery 16s pipeline

  #20 opened 3 years ago by evilvenom
  1

• problems with writing reslults to a file in rna_dna_norm.py

  #18 opened 3 years ago by hilasha2
  1

• strainphlan_ordination_vis R script

  #17 opened 4 years ago by fbeghini
  3

• groups: invalid choice: 'uniref90_level4ec' (choose from 'uniref90_rxn', 'uniref50_rxn')\n"`

  #16 opened 4 years ago by Mavlarn
  1

• Problem with setting environment variable $BIOBAKERY_WORKFLOWS_DATABASES

  #15 opened 4 years ago by gssin20
  3

• the password of the image(win10,visualbox and vagrant)

  #13 opened 4 years ago by WatsonWoo
  1

• workflow 16s error

  #12 opened 4 years ago by BioinfoMonzino
  1

• Cannot install full shotgun databases (wmgx) in the biobakery VM image

  #6 opened 4 years ago by hyfood
  10

• error:biobakery_workflows_databases --install 16s_usearch

  #10 opened 4 years ago by LiZhihua1982
  0

• Errors:"biobakery_workflows_databases --install isolate_assembly"

  #9 opened 4 years ago by LiZhihua1982
  0

• Incorrect download_eggnog_data.py arguments

  #7 opened 4 years ago by evanroyrees
  2

• Access to Terra Workspace

  #5 opened 5 years ago by shbrief
  1

• biobakery_workflows_databases not working

  #2 opened 5 years ago by djbradshaw2
  1