Biocode, LLC

Data for understanding biodiversity and the environment

Pinned Repositories

bcid
Biocode Commons Identifiers
Language:Java2 3 30
biocode-fims
Biocode Field Information Management System
Language:JavaScript4 5 1082
biocode-fims-commons
Biocode Field Information Management System
Language:Java3 3 500
biocode-lims
The Biocode LIMS plugin integrates Geneious with your lab workflow, allowing you to track processes through tissue sample, extraction, PCR, sequencing and assembly. It is best suited for large scale DNA barcoding efforts.
Language:Java10 6 1290
geome-db
Language:Java2 4 570
geome-ui
Language:JavaScript3 6 4314
geomedb
A set of R scripts for accessing and working with FIMS data from R
Language:R2 5 52
localcontexts_db
Local contexts back-end
Language:Python6 4 3762
ontology-data-pipeline
A high-throughput ontology-based pipeline for data integration
Language:Python14 6 445
ppo-data-pipeline
Language:Python4 3 30

Biocode, LLC's Repositories

biocodellc/ontology-data-pipeline
A high-throughput ontology-based pipeline for data integration
Language:Python14 6 445
biocodellc/biocode-lims
The Biocode LIMS plugin integrates Geneious with your lab workflow, allowing you to track processes through tissue sample, extraction, PCR, sequencing and assembly. It is best suited for large scale DNA barcoding efforts.
Language:Java10 6 1290
biocodellc/localcontexts_db
Local contexts back-end
Language:Python6 4 3762
biocodellc/ppo-data-pipeline
Language:Python4 3 30
biocodellc/biocode-fims-commons
Biocode Field Information Management System
Language:Java3 3 500
biocodellc/geome-ui
Language:JavaScript3 6 4314
biocodellc/bcid
Biocode Commons Identifiers
Language:Java2 3 30
biocodellc/geome-db
Language:Java2 4 570
biocodellc/geomedb
A set of R scripts for accessing and working with FIMS data from R
Language:R2 5 52
biocodellc/biocode-fims-tissues
Language:Java1 3 0
biocodellc/bioValidator
Language:Java1 3 0
biocodellc/biscicol-fims
Biocode-Fims app at www.biscicol.org
Language:JavaScript1 2 31
biocodellc/biscicol-server
Service endpoint code for searching PPO elasticsearch data
Language:JavaScript1 4 82
biocodellc/geome-configurations
Manage project configurations for geome
Language:Vue1 3 1
biocodellc/localcontexts_ui
User Interface for local contexts interface
1 4 190
biocodellc/query_fetcher
Fetch data from a named graph using a SPARQL query you pass in
Language:Java1 3 0
biocodellc/arms-fims
Biocode FIMS backend for ARMS Interface
Language:JavaScript0 3 240
biocodellc/biocode-fims-evolution
Plugin to integrate with Evolution API
Language:Java1 0
biocodellc/biocode-fims-photos
Language:Java2 2
biocodellc/biocode_website
Code to build the Biocode website
Language:HTML2 01
biocodellc/documentation
Issues and Documentation on the FIMS family of services
3 0
biocodellc/elk_pipeline
Language:Python
biocodellc/geome-scripts
A place for monitoring scripts for GEOME
Language:Python1 0
biocodellc/geome-statistics
Language:HTML
biocodellc/gradle-fims
Language:Groovy2 0
biocodellc/localcontexts_json
Language:Python
biocodellc/md-data-table
Material Design Data Table for Angular Material
Language:JavaScript2 0
biocodellc/ppo-data-interface
Visual global plant phenology
Language:JavaScript2 171
biocodellc/ror-parser
Python script to parse ROR JSON file
Language:Python
biocodellc/trait-viz
Visualize trait data
Language:JavaScript2 0