Pinned Repositories
biochatter
Backend library for conversational AI in biomedicine
biochatter-light
The light frontend for BioChatter, in pure Python
biochatter-next
The advanced implementation for BioChatter, using Next.js
biochatter-server
Flask server for BioChatter integration into web apps
biocypher
A unifying framework for biomedical research knowledge graphs
clinical-knowledge-graph
open-targets
patient-kg
BioCypher Knowledge Graph for clinical patient data (ICD10, Snomed CT, Loinc, german OPS)
pole
Demo data repository (crime statistics)
project-template
Template for creating a BioCypher-driven knowledge graph
biocypher's Repositories
biocypher/biocypher
A unifying framework for biomedical research knowledge graphs
biocypher/biochatter
Backend library for conversational AI in biomedicine
biocypher/biochatter-light
The light frontend for BioChatter, in pure Python
biocypher/clinical-knowledge-graph
biocypher/open-targets
biocypher/project-template
Template for creating a BioCypher-driven knowledge graph
biocypher/biochatter-next
The advanced implementation for BioChatter, using Next.js
biocypher/metalinks
biocypher/patient-kg
BioCypher Knowledge Graph for clinical patient data (ICD10, Snomed CT, Loinc, german OPS)
biocypher/pole
Demo data repository (crime statistics)
biocypher/meta-graph
A meta-graph of BioCypher modular adapters, created by a BioCypher pipeline
biocypher/scverse-x-biochatter
Repository for collecting code generated in the 2024 de.NBI BioHackathon 3 that does not clearly belong somewhere else
biocypher/biochatter-paper
The Manubot repository for writing the BioChatter paper
biocypher/collectri
biocypher/decider-genetics
biocypher/.github
biocypher/biochatter-server
Flask server for BioChatter integration into web apps
biocypher/biomedical-resource-ontology
A repository to store our version of the BRO
biocypher/OTAR3088
Project management for the BioCypher parts of OTAR3088
biocypher/biocypher-paper
biocypher/chat
Simple landing page for the two BioChatter frontends
biocypher/DFG528753569
Home of the software sustainability project under No. DFG 528753569
biocypher/drug-interactions
A BioCypher KG to collect drug interactions
biocypher/graphpack
A Python tool to perform graph compression and visualization
biocypher/igvf-catalog
Catalog API for the IGVF project (fork from the original at IGVF-DACC)
biocypher/issues
This is a special repository that contains only issues that go beyond a single package and rather affect the whole ecosystem and its management.
biocypher/omnipath
biocypher/project-planning
Demo use case for BioChatter: scheduling of project work
biocypher/scirpy-collaboration
Repository for organising the scirpy-biocypher collaboration
biocypher/xinference-docker-builtin