Pinned Repositories
asvoccur
Tools for ASV occurrence data in SBDI
biologging-sensor-client
SBDI Biologging webclient portal, using the biologging-API
coidb
A small python package for downloading and processing metabarcoding references
mol-mod
Module for sequence-based occurrence data in Biodiversity Atlas Sweden.
r-functionality
R functionality for SBDI data portal
repo-overview
Overview of SBDI-related repos
sbdi-gtdb
Files for the SBDI Sativa curated GTDB 16S sequence files
sbdi-phylomarkercheck
SOS
Species Observation System (SOS)
workshops
Online material for various workshops
Swedish Biodiversity Data Infrastructure's Repositories
biodiversitydata-se/SOS
Species Observation System (SOS)
biodiversitydata-se/mol-mod
Module for sequence-based occurrence data in Biodiversity Atlas Sweden.
biodiversitydata-se/biologging-sensor-client
SBDI Biologging webclient portal, using the biologging-API
biodiversitydata-se/coidb
A small python package for downloading and processing metabarcoding references
biodiversitydata-se/asvoccur
Tools for ASV occurrence data in SBDI
biodiversitydata-se/biologging-sensor-datamodel
Datamodel documentation of the SBDI Biologging portal
biodiversitydata-se/ala-bie-hub
BIE (Biodiversity Information Explorer) hub - merge of old ala-bie and bie-plugin
biodiversitydata-se/ala-cas-5
ALA CAS 5 implementation
biodiversitydata-se/apikey
Administration and validation of app to app API keys
biodiversitydata-se/biocollect
Biocollect front end application for Bioatlas
biodiversitydata-se/documentation-overview
Documentation starting point
biodiversitydata-se/repo-overview
Overview of SBDI-related repos
biodiversitydata-se/ala-namematching-service
Service for ALA name matching to aid pipelines integration
biodiversitydata-se/ala-sensitive-data-service
Sensitive data service suitable for use with the pipelines project
biodiversitydata-se/api-docs
SBDI API Documentation
biodiversitydata-se/base-branding
Base LA header, banner, footer branding and index for new Living Atlas deployments
biodiversitydata-se/bie-index
Taxonomic search services
biodiversitydata-se/bie-solr
Dockerized solr instance used by bie-index
biodiversitydata-se/biocache-service
Occurrence & mapping webservices
biodiversitydata-se/collectory
Metadata registry for the Atlas
biodiversitydata-se/dashboard
SBDI Dashboard
biodiversitydata-se/data-quality-filter-service
biodiversitydata-se/gbif-taxonomy-for-la
Utilities to adapt the GBIF Backbone Taxonomy for it usage by LA portals
biodiversitydata-se/image-service
Image repository and tiling services
biodiversitydata-se/logger-service
Atlas event logging
biodiversitydata-se/pipelines
Pipelines for data processing (GBIF and LivingAtlases)
biodiversitydata-se/regions
Regions front end web application
biodiversitydata-se/sds-webapp2
Sensitive Data Service webapp
biodiversitydata-se/spatial-hub
New spatial portal front end using AngularJS
biodiversitydata-se/specieslist-webapp
Species lists and traits tool