Pinned Repositories
anndataR
AnnData interoperability in R
bbrowserx-terraform
bbrowserx-wiki
bioflex
cast3
hera
hera-t
Hera-T, a fast and accurate tool for estimating gene abundances in single cell data generated by the 10X-Chromium protocol
py-monocle
Python implementation of Monocle
signac
An analytics package for single cell data
TuringAssembler
An accurate genome assembler for read-cloud technology
bioturing's Repositories
bioturing/py-monocle
Python implementation of Monocle
bioturing/bioflex
bioturing/anndataR
AnnData interoperability in R
bioturing/bbrowserx-terraform
bioturing/bbrowserx-wiki
bioturing/CellChat
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
bioturing/charts
BioTuring Helm Charts
bioturing/code-server
VS Code in the browser
bioturing/conda-pack
Package conda environments for redistribution
bioturing/fstArray
Leveraging 'fst' for fast on-disk matrices
bioturing/ggtree
:christmas_tree:Visualization and annotation of phylogenetic trees
bioturing/Giotto
Spatial omics analysis toolbox
bioturing/GiottoClass
bioturing/GiottoUtils
bioturing/GiottoVisuals
bioturing/HDF5Array
HDF5 backend for DelayedArray objects
bioturing/jupyter-collaboration
A Jupyter Server Extension Providing Support for Y Documents
bioturing/jupyterhub
Jupyterhub main repository
bioturing/jupyterlab
JupyterLab computational environment.
bioturing/jupyterlab-git
A Git extension for JupyterLab
bioturing/jupyterlab-gitlab
A JupyterLab extension for browsing GitLab repositories
bioturing/jupyterlab-h5web
A JupyterLab extension to explore and visualize HDF5 file contents. Based on https://github.com/silx-kit/h5web.
bioturing/minio
High Performance Object Storage for AI
bioturing/openseadragon
An open-source, web-based viewer for zoomable images, implemented in pure JavaScript.
bioturing/python-ci-actions
bioturing/rstudio
RStudio is an integrated development environment (IDE) for R
bioturing/sceasy
A package to help convert different single-cell data formats to each other
bioturing/seurat-disk
Interfaces for HDF5-based Single Cell File Formats
bioturing/turing_segment
BioTuring Cell Segmentation - Light Speed
bioturing/zarr-python
An implementation of chunked, compressed, N-dimensional arrays for Python.