Pinned Repositories
AMTRAC
AMazing TRimming And Cleaning
Awesome-Linux-Software
🐧 A curated list of awesome applications, softwares, tools and other materials for Linux distros.
blasr
BLASR: The PacBio® long read aligner
copticEaster
Calculate coptic easter date
fq2fasta
convert fastq to fasta very fast!
mbox2eml
Simple tool to convert mbox file from google takeout to a folder of eml files
MergeReads
Create NNN joined reads from Paired end reads
Mine-Pubmed
Functions to return PMIDs and document information from a given query string.
Notes-on-git
add notes to git from chrome
workingwise2
modified version of wise2 , compiles on modern compilers
bishoyh's Repositories
bishoyh/copticEaster
Calculate coptic easter date
bishoyh/fq2fasta
convert fastq to fasta very fast!
bishoyh/mbox2eml
Simple tool to convert mbox file from google takeout to a folder of eml files
bishoyh/MergeReads
Create NNN joined reads from Paired end reads
bishoyh/Notes-on-git
add notes to git from chrome
bishoyh/ORFeome-calculator
Calculate sizes and generate ORF sequences from genomes
bishoyh/ppmdc
Prediction by partial matching DNA compressor
bishoyh/soft2hard
soft2hard masking
bishoyh/AMTRAC
AMazing TRimming And Cleaning
bishoyh/Awesome-Linux-Software
🐧 A curated list of awesome applications, softwares, tools and other materials for Linux distros.
bishoyh/workingwise2
modified version of wise2 , compiles on modern compilers
bishoyh/afcluster
alignment free clustering utility
bishoyh/atcg
Automatically exported from code.google.com/p/atcg
bishoyh/bgsim
Simulation of biogeography
bishoyh/biomineDB
bishoyh/bishoyh
Config files for my GitHub profile.
bishoyh/blast2Centrifuge
bishoyh/bloomtree
bishoyh/countseq
count fasta records really fast
bishoyh/docking_101
Fun experiments with proteins and small molecules
bishoyh/exif
View and Remove exif data from images in the browser
bishoyh/Exploiting-Metabolic-Networks-For-Fun-and-Profit
bishoyh/GIGAIII_bioinformatics_workshop
Tutorial materials for GIGA III bioinformatics workshop, Curaçao 19-21 October 2018
bishoyh/HTH
Finding Helix-Turn-Helix in protein Fasta files
bishoyh/nebula
A scalable overlay networking tool with a focus on performance, simplicity and security
bishoyh/PyFBA
A python implementation of flux balance analysis to model microbial metabolism
bishoyh/Reads
Log of interesting things I read over the internet
bishoyh/sampler
Tool for shell commands execution, visualization and alerting. Configured with a simple YAML file.
bishoyh/trust
An interactive guide to the game theory of cooperation
bishoyh/word2vec
Automatically exported from code.google.com/p/word2vec