bjreisman
Chemical biologist who likes to code. Resident Physician-Scientist at Johns Hopkins
Johns Hopkins MedicineBaltimore, MD
Pinned Repositories
2021_NCB_apoptolidin
Code to reproduce figures from Reisman 2021
bjreisman.github.io
cellrouter
Reconstruction of complex single-cell trajectories using CellRouter
CytoML
cytotidyr
Find the cells that bring you joy... and turn them into flat files
DebarcodeR
For demultiplexing FCB flow cytometry
DoubletFinder
R package for detecting doublets in single-cell RNA sequencing data
drc
Fitting dose-response models in R
dynutils
Common dynverse functions
umap_cytof
UMAP analysis of mass-cytometry data.
bjreisman's Repositories
bjreisman/cytotidyr
Find the cells that bring you joy... and turn them into flat files
bjreisman/bjreisman.github.io
bjreisman/umap_cytof
UMAP analysis of mass-cytometry data.
bjreisman/2021_NCB_apoptolidin
Code to reproduce figures from Reisman 2021
bjreisman/cellrouter
Reconstruction of complex single-cell trajectories using CellRouter
bjreisman/CytoML
bjreisman/DebarcodeR
For demultiplexing FCB flow cytometry
bjreisman/DoubletFinder
R package for detecting doublets in single-cell RNA sequencing data
bjreisman/drc
Fitting dose-response models in R
bjreisman/dynutils
Common dynverse functions
bjreisman/FIt-SNE
Fast Fourier Transform-accelerated Interpolation-based t-SNE (FIt-SNE)
bjreisman/flowWorkspace
flowWorkspace
bjreisman/ggplot2
An implementation of the Grammar of Graphics in R
bjreisman/ggpointdensity
:chart_with_upwards_trend: :bar_chart: Introduces geom_pointdensity(): A Cross Between a Scatter Plot and a 2D Density Plot.
bjreisman/ggrastr
Raster geoms for ggplot2
bjreisman/ggridges
Geoms to make ridgeline plots with ggplot2
bjreisman/git_training
Training repository for Bios301 students
bjreisman/hdf5r
bjreisman/LondonCytometry2019
Intro to working with Flow Cytometry Data in R
bjreisman/NGS_mutation_rate_assay
This repository contains scripts that were used during my use of Illumina sequencing to determine mutation rates.