Pinned Repositories
blasern.github.io
cornet
Correlation networks with R
dcph
Divisive Cover Persistent Homology
distance_sparcifier
Sparcify Distance Matrices
NORA2024_GDL
NORA summer school 2024 on geometric deep learning
R-cytometry
rdist
An R package to calculate pairwise distances
Rripser
R bindings to ripser
TESEA
Topological Edge Set Enrichment Analysis
Sparse-Dowker-Nerves
Proof of concept implementation of Sparse Dowker Nerves
blasern's Repositories
blasern/rdist
An R package to calculate pairwise distances
blasern/R-cytometry
blasern/blasern.github.io
blasern/cornet
Correlation networks with R
blasern/CytoML
blasern/dcph
Divisive Cover Persistent Homology
blasern/distance_sparcifier
Sparcify Distance Matrices
blasern/Rripser
R bindings to ripser
blasern/TESEA
Topological Edge Set Enrichment Analysis
blasern/dplyr
dplyr: A grammar of data manipulation
blasern/edd
Empirical distribution distance
blasern/fairdomhubr
blasern/gems
general multistate simulation model
blasern/KDEpy
Kernel Density Estimation in Python
blasern/persim
Easy Persistence Images in Python
blasern/persistence_benchmarks
blasern/PersistenceNetwork
Persistence networks
blasern/PH-roadmap
blasern/ph_datasets
Persistent Homology Datasets
blasern/ripser
Ripser: a lean C++ code for the computation of Vietoris–Rips persistence barcodes
blasern/ripser-plusplus
Ripser++: GPU-accelerated computation of Vietoris–Rips persistence barcodes
blasern/ripser.py
A Lean Persistent Homology Library for Python
blasern/rivet
RIVET is a tool for Topological Data Analysis, in particular two-parameter persistent homology.
blasern/scikit-tda
Topological Data Analysis for Python🐍
blasern/TopologyLayer
A Topology Layer for Machine Learning : Persistent Homology + Features for PyTorch
blasern/umap
Uniform Manifold Approximation and Projection
blasern/warnS3