bluegreen-labs/chlorophyll_cycling

Recreating the chlorophyll cycling framework

Chlorophyll cycling model

Reproducible worked example of a pigment mass balance model for leaf senescence timing.

• Data gathering and pre-processing scripts are stored with raw data in data-raw and should be executed sequentially
  • final model input is stored in data
• A demo analysis is provided in the analysis folder, buffering model optimization
  • output is stored in data
• the report is rendered on github from the vignette and buffered data
  • vignettes are stored in the vignettes folder
  • can be rendered locally (using knitr or pkgdown)