Pinned Repositories
Crackling
CRISPR, faster, better – The Crackling method for whole-genome target detection
Crackling-phased
*HaploCrackling* -- The Crackling-based method for variant-aware, whole-genome CRISPR-Cas9 target detection
CracklingPlusPlus
CRISPR-benchmark
Supplementary data for "A Benchmark of Computational CRISPR-Cas9 Guide Design Methods"
CRISPR_DeepEnsemble
DMI
Algorithm for module identification in biological networks
K562
Identification of allele-specific CRISPR targets in the K562 cell line.
mm10db
Whole-genome CRISPR target detection, implementing the method described in Sunagawa et al., "Mammalian Reverse Genetics without Crossing Reveals Nr3a as a Short-Sleeper Gene", Cell Reports 14(3)662-677, 2016
Biomedical Data Science group's Repositories
bmds-lab/Crackling
CRISPR, faster, better – The Crackling method for whole-genome target detection
bmds-lab/DMI
Algorithm for module identification in biological networks
bmds-lab/Crackling-phased
*HaploCrackling* -- The Crackling-based method for variant-aware, whole-genome CRISPR-Cas9 target detection
bmds-lab/CracklingPlusPlus
bmds-lab/CRISPR-benchmark
Supplementary data for "A Benchmark of Computational CRISPR-Cas9 Guide Design Methods"
bmds-lab/CRISPR_DeepEnsemble
bmds-lab/K562
Identification of allele-specific CRISPR targets in the K562 cell line.
bmds-lab/mm10db
Whole-genome CRISPR target detection, implementing the method described in Sunagawa et al., "Mammalian Reverse Genetics without Crossing Reveals Nr3a as a Short-Sleeper Gene", Cell Reports 14(3)662-677, 2016