bnorthan
I currently work as a contract Image Processing R&D Engineer. I have helped groups develop deconvolution and single particle localization algorithms
Pinned Repositories
PoL-BioImage-Analysis-TS-GPU-Accelerated-Image-Analysis
PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track
CLIJ-Practice
Practice Repo to learn CLIJ
deconware-algorithms
Low level deconvolution algorithm code written in Java using Imglib.
deconware-ops
Deconvolution and related utilities wrapped using the imagej-ops framework.
projects
Deconvolution and image processing code for imagej (imagej2) and imglib (imglib2)
clij2-fft
imagej-ops
ImageJ Ops: "Write once, run anywhere" image processing
tutorials
ImageJ2 programming examples
deconvolution-gpu-dl-course
Course: Exploring the Intersection of Deconvolution, GPU Computing, and Deep Learning
tnia-python
A collection of useful python utilities from True North Intelligent Algorithms
bnorthan's Repositories
bnorthan/imagej-example
starter project for imagej hacking and learning
bnorthan/inf-428-data-analytics-online
Online version of inf-428
bnorthan/PoL-BioImage-Analysis-TS-GPU-Accelerated-Image-Analysis
PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track
bnorthan/regDeconProject
code of the registration and deconvolution project
bnorthan/scoreware-site
bnorthan/3Dscript
Create 3D/4D animations using a natural language-based syntax
bnorthan/cards
Card game code
bnorthan/CLIc_prototype
GPU-accelerated Image Processing library
bnorthan/clij2-docs
Documentation for CLIJ2
bnorthan/covid-19-data
An ongoing repository of data on coronavirus cases and deaths in the U.S.
bnorthan/cs231n.github.io
Public facing notes page
bnorthan/data_course_work
my course work for data analysis class, this will double as a website.
bnorthan/docs
Temporary place for markdown documentation.
bnorthan/falsecolor
FalseColor Python is a rapid digital staining module designed for translating two-channel fluorescence images (i.e. a nuclear and cytoplasmic stain) to the traditional H&E histopathology color space.
bnorthan/Group2Plugin
bnorthan/image-processing-template
bnorthan/intro-to-data-analysis
An introduction to Python and the Python data analysis ecosystem
bnorthan/jekyllpractice
Just testing a simple Jekyll tutorial
bnorthan/microImageLib
A collection of 3D image processing functions with GPU implementation: TIFF reading/writing, affine transformation, max projection, registration, deconvolution etc.
bnorthan/napari-experiments
Napari related experiments and examples
bnorthan/Open3DSIM
This code was created by Ruijie Cao and Prof. Peng Xi in Peking University for 3D SIM reconstruction.
bnorthan/ops-experiments
EXPERIMENTAL repository for exploring Ops approaches, algorithms, etc.
bnorthan/pom-scijava
Friendly base POM for all SciJava-based software
bnorthan/raceresults
Utilities to read running race results and render on a github.io site or Django
bnorthan/reproducible_bioimage_analysis
bnorthan/rl_positivity_sim
A quick demonstration of the effects of the positivity constraint in Richardson-Lucy deconvolution
bnorthan/rotg-us
bnorthan/Virtual15K_5K
bnorthan/VirtualColonieMile
Virtual Colonie Mile Website
bnorthan/VirtualXC