Chair of Bioinformatics Jena
Official github of the Chair of Bioinformatics at FSU Jena (Sebastian Böcker)
Jena
Pinned Repositories
bcd-supertrees
The bcd supertrees algorithm implemented in java as a command line tool.
docs.sirius.github.io
gecko
The official repository of the gecko gene cluster software
gscm-supertrees
Greedy Strict Consensus Merger Project: containing the algorithmic part (gscm-lib) and the comandline tool (gscm-cli))
myopic-mces
Computation of myopic MCES distance
myopic-mces-data
passatuto
source code of passatuto by Kerstin Scheubert
Rsirius
sirius-apis
standardizeUtils
A Python package for standardizing SMILES and InChI strings with RDKit and PubChem
twosteprt
Chair of Bioinformatics Jena's Repositories
boecker-lab/passatuto
source code of passatuto by Kerstin Scheubert
boecker-lab/standardizeUtils
A Python package for standardizing SMILES and InChI strings with RDKit and PubChem
boecker-lab/docs.sirius.github.io
boecker-lab/myopic-mces-data
boecker-lab/Rsirius
sirius-apis
boecker-lab/bcd-supertrees
The bcd supertrees algorithm implemented in java as a command line tool.
boecker-lab/gecko
The official repository of the gecko gene cluster software
boecker-lab/myopic-mces
Computation of myopic MCES distance
boecker-lab/ftree-msn
Java code for MSn fragmentation tree computation as described in Scheubert et al.: https://doi.org/10.1007/978-3-662-44753-6_17
boecker-lab/gscm-supertrees
Greedy Strict Consensus Merger Project: containing the algorithmic part (gscm-lib) and the comandline tool (gscm-cli))
boecker-lab/mzmine2
MZmine 2 source repository
boecker-lab/twosteprt
boecker-lab/coin-or-clp-java-api
ILP solver API for FragTree computation using the coin-or CLP library