Pinned Repositories
autoscoperm.slicer.org
Source code to the site describing the SlicerAutoscoperM extension. This site is published at autoscoperm.slicer.org and maintained by @BrownBiomechanics and @Kitware.
BoneTextureExtension
Slicer extensions for computing feature maps of N-Dimensional images using well-known texture analysis methods.
BoneTextureSnapshots
bpaniagua.github.io
bppWeb
CustomSlicerGenerator
Tool to help deploy custom applications
DiagnosticIndex
Tool to classify 3D surface models based in Statistical Shape Models of pathology. This work has been funded by the National Institute of Dental Research (NIDCR) and the National Institute for Biomedical Imaging and Bioengineering (NIBIB) grant R01 DE024450, “Quantification of 3D Bony Changes in Temporomandibular Joint Osteoarthritis”.
DiagnosticIndexCLI
DiagnosticIndexExtension
ExtensionsIndex
Slicer extensions index
freelancer-theme
Jekyll theme based on Freelancer Start Bootstrap theme
bpaniagua's Repositories
bpaniagua/autoscoperm.slicer.org
Source code to the site describing the SlicerAutoscoperM extension. This site is published at autoscoperm.slicer.org and maintained by @BrownBiomechanics and @Kitware.
bpaniagua/BoneTextureExtension
Slicer extensions for computing feature maps of N-Dimensional images using well-known texture analysis methods.
bpaniagua/BoneTextureSnapshots
bpaniagua/bpaniagua.github.io
bppWeb
bpaniagua/CustomSlicerGenerator
Tool to help deploy custom applications
bpaniagua/DiagnosticIndex
Tool to classify 3D surface models based in Statistical Shape Models of pathology. This work has been funded by the National Institute of Dental Research (NIDCR) and the National Institute for Biomedical Imaging and Bioengineering (NIBIB) grant R01 DE024450, “Quantification of 3D Bony Changes in Temporomandibular Joint Osteoarthritis”.
bpaniagua/DiagnosticIndexCLI
bpaniagua/DiagnosticIndexExtension
bpaniagua/ExtensionsIndex
Slicer extensions index
bpaniagua/freelancer-theme
Jekyll theme based on Freelancer Start Bootstrap theme
bpaniagua/groupAnalysis
bpaniagua/GROUPS
Group wise registration for 3d-models
bpaniagua/ImageNoise
Computes the Signal to Noise Ratio in MRI
bpaniagua/ITK
Insight Segmentation and Registration Toolkit -- Mirror
bpaniagua/MFSDA_Python
Multivariate Functional Shape Data Analysis in Python (MFSDA_Python) is a Python based package for statistical shape analysis. A multivariate varying coefficient model is introduced to build the association between the multivariate shape measurements and demographic information and other clinical, biological variables. Statistical inference, i.e., hypothesis testing, is also included in this package, which can be used in investigating whether some covariates of interest are significantly associated with the shape information. The hypothesis testing results are further used in clustering based analysis, i.e., significant suregion detection. This MFSDA package is developed by Chao Huang and Hongtu Zhu from the BIG-S2 lab.
bpaniagua/PickAndPaintExtension
bpaniagua/qt-easy-build
Scripts allowing to easily build Qt with OpenSSL support on Linux, MacOSX or Windows
bpaniagua/RegistrationBasedCorrespondence
bpaniagua/RodentThickness
RodentThickness is an automatic cortical thickness measurement tool for rat brains.
bpaniagua/Slicer
Multi-platform, free open source software for visualization and image computing.
bpaniagua/slicer-wiki-scripts
This repository is a collection of scripts useful to update the Slicer wiki
bpaniagua/slicer.org
Prototype of a potential replacement for the exisiting landing page
bpaniagua/slicerdmri.github.io
SlicerDMRI organization website repository
bpaniagua/SlicerSALT
An open-source, free comprehensive software that will allow biomedical scientists to precisely locate shape changes in their imaging studies. This software called Slicer Shape AnaLysis Toolbox (SlicerSALT), will enhance the intuitiveness and ease of use for such studies, as well as allow researchers to find shape changes with higher statistical power. Altogether this constitutes a crucial resource for the imaging field that will enable many and important new findings in biomedical imaging studies.
bpaniagua/SlicerSurfaceToolbox
Supports various cleanup and optimization processes on surface models
bpaniagua/SlicerVerse
bpaniagua/SPHARM-PDM
Shape analysis has become of increasing interest to the medical community due to its potential to precisely locate morphological changes between healthy and pathological structures. SPHARM-PDM is a tool that computes point-based models using a parametric boundary description for the computing of Shape analysis.
bpaniagua/ToothFracture
Simulation of a fracture in a tooth
bpaniagua/UcdToVTUReader