Pinned Repositories
acCLImate
Automated Class-based Command Line Interfaces (using) Methods Annotated To Execute
bioinfo-containers
Containers (currently singularity) for bioinformatics processing
gemini
a lightweight db framework for disease and population genetics.
HasBin
A project for keeping track of genes/diagnoses and custom annotations
homebrew-cider-factory
Homebrew (or linuxbrew) recipes that are useful for me
pegjs-bonsai
Generate "well-pruned" trees from a pegjs grammar
SeqSounder
A 'sounder' to determine depth of coverage of genetic sequence
varitas
Variant analysis with rapid incorporation of tabular annotation sources
clingen-interpretation
Allele (variant) interpretation model and API for ClinGen
SEPIO-ontology
Ontology for representing scientific evidence and provenance information
bpow's Repositories
bpow/cgwi-php-helm
Helm chart for ClinGen Workflow Infrastructure php apps
bpow/CNVpytor
a python extension of CNVnator -- a tool for CNV analysis from depth-of-coverage by mapped reads
bpow/DECoN
bpow/docker-primer3
Docker build for the primer3 tool for PCR primer design
bpow/freebayes
Bayesian haplotype-based genetic polymorphism discovery and genotyping.
bpow/GenomeDiver
Disease diagnosis using phenotypes and genotypes.
bpow/genomicsdb
bpow/h
Annotate with anyone, anywhere.
bpow/httpie-feedstock
A conda-smithy repository for httpie.
bpow/IRD_database_browser
Browser for genetic variantion for inherited retinal disorders
bpow/jamulus-headless-docker
Docker image for headless jamulus server, using upstream's deb artifact
bpow/k8s-wait-for
A simple script that allows to wait for a k8s service, job or pods to enter a desired state
bpow/keepass-diff
A CLI-tool to diff Keepass (.kdbx) files. Useful, if syncing with Dropbox or NextCloud and getting multiple files due to conflicts.
bpow/kickstart-modular.nvim
A launch point for your personal nvim configuration
bpow/linkml-project-template
A template for LinkML projects using poetry and gen-project
bpow/logto
🧑🚀 The better identity infrastructure for developers and the open-source alternative to Auth0.
bpow/logto-chart
unofficial helm chart for logto identity infrastructure
bpow/optimal-select
Get efficient & robust CSS selectors for HTML elements
bpow/ORION
Code that parses datasets from various sources and converts them to load graph databases.
bpow/Pangolin
Pangolin is a deep-learning method for predicting splice site strengths.
bpow/postgres2k8s
Migrate and instantiate an existing postgres DB into kubernetes
bpow/Ribbon
A genome browser that shows long reads and complex variants better
bpow/snvstory
Rapid and accurate ancestry inference using SNVs.
bpow/SpliceAI-lookup
Website for checking SpliceAI and Pangolin scores:
bpow/strikv
Silly trivial REST-like internet-accessible key-value store
bpow/strudel
Experimental port of tidalcycles to Javascript
bpow/variant-functional-assay
Data model for representing results of functional assays of genetic variant effect
bpow/vcf-js
High performance Variant Call Format (VCF) parser in pure JavaScript
bpow/wf-human-variation
bpow/zitadel-charts
This repository contains Helm charts for running ZITADEL in Kubernetes