Pinned Repositories
app-dp-profile
app-dp-removetract
app-recobundles
This application takes in a full tractography (Multishell Tractography w/CSA or Multishell Tractography w/ SHORE) and the output from the White Matter Segmentation and uses the Recobundles algorithm to find the corresponding white matter segmentation in the full tractogram.
brainpy
Python Tools for Brain Analysis
encode
Method for encoding brain connectomes in multidimensional arrays (tensors).
ensemble_tractography
Track brain connections combining multiple tracking methods and parameters.
glue
Scripts for AD projects.
life-1
MatLab routines for evaluating the quality of white-matter connectomes generated using diffusion-weighted imaging.
o3d-code
Open Derivatives Diffusion Data scripts used to generate and organize the data
wma_verttracks
brainlife.io's Repositories
brain-life/encode
Method for encoding brain connectomes in multidimensional arrays (tensors).
brain-life/app-dp-profile
brain-life/app-recobundles
This application takes in a full tractography (Multishell Tractography w/CSA or Multishell Tractography w/ SHORE) and the output from the White Matter Segmentation and uses the Recobundles algorithm to find the corresponding white matter segmentation in the full tractogram.
brain-life/brainpy
Python Tools for Brain Analysis
brain-life/ensemble_tractography
Track brain connections combining multiple tracking methods and parameters.
brain-life/life-1
MatLab routines for evaluating the quality of white-matter connectomes generated using diffusion-weighted imaging.
brain-life/o3d-code
Open Derivatives Diffusion Data scripts used to generate and organize the data
brain-life/app-dp-removetract
brain-life/dp
dp test
brain-life/glue
Scripts for AD projects.
brain-life/mba
Matlab Brain Anatomy. This is a set of routines for displaying and manipulating brain anatomy using MatLab.
brain-life/pestillilab_projects
This repository contains code beign developed for a majority of the projects being undertaken by the Pestilli Research Group.
brain-life/wma_verttracks
brain-life/wmp
White matter plasticity
brain-life/app-AFQ_no-life
(deprecated by brain-life/app-tractclassification)
brain-life/app-DorsalAttentionNetwork
Index specific connections for a project
brain-life/app-dp-modelfit
brain-life/chiasm
brain-life/dipy
Diffusion MR Imaging in Python
brain-life/hyperbrain
brain-life/lifebid2sda
Repository to keep track of lifebid projects on DC2 using the archive/restore method
brain-life/mrTools
mrTools - matlab based tools for fMRI
brain-life/o3d
Open Derivatives Diffusion Data
brain-life/vistasoft
DEPRECATED: brain-life no longer uses this - we use vistalab/vistasoft
brain-life/WMmorphology
code for white matter morphology project
brain-life/workflow_ui
Workflow UI prototype for Brain-Life