Pinned Repositories
brainfo
See what will happen here
brainfo.github.io
blog
covid_analysis
cscore
denblab_trial
genetk
gene set, pathway and GWAS enrichment, and network analysis
pyrate
pirating openai using openai-python
scutils
utils supple to scanpy
veppy
Predict DNA variance effects
visiumR
R source file for analysing 10x visium data incl. digital unroll
brainfo's Repositories
brainfo/brainfo
See what will happen here
brainfo/brainfo.github.io
blog
brainfo/covid_analysis
brainfo/cscore
brainfo/denblab_trial
brainfo/Fastmap
identify causal mutation in C.elegans
brainfo/GeneralUtils
general bioinformatic jobs
brainfo/genetk
gene set, pathway and GWAS enrichment, and network analysis
brainfo/HiC_data
A (continuously updated) collection of references to Hi-C data. Predominantly human/mouse Hi-C data, with replicates.
brainfo/HiC_tools
A collection of tools for Hi-C data analysis
brainfo/pyrate
pirating openai using openai-python
brainfo/scutils
utils supple to scanpy
brainfo/snRNAsnake
a snakemake pipeline for snRNA-seq data analysis
brainfo/veppy
Predict DNA variance effects
brainfo/visiumR
R source file for analysing 10x visium data incl. digital unroll
brainfo/jc_happy
brainfo/phd_book_quarto
brainfo/tadtool
TADtool is an interactive tool for the identification of meaningful parameters in TAD-calling algorithms for Hi-C data.
brainfo/thesisBook
brainfo/Weekly.jl
to schedule weekly tasks. written by agent