bramvandijk88

Computational Biologist

No title

Pinned Repositories

cacatoo
A javascript library for building, exploring, and sharing spatially structured models of biological systems
Language:JavaScript12 2 294
gapseq
Informed prediction and analysis of bacterial metabolic pathways and genome-scale networks
Language:R00
HGT_Genes_And_SGEs
Source code for "Slightly beneficial genes are retained by evolving Horizontal Gene Transfer despite selfish elements"
Language:R01
HGTvsDUP
Simple moran process of bacterial population undergoing HGT / duplications / deletions of genes.
Language:Python10
HGTvsDUP_nodejs
Nodejs implementation of HGTvsDUP
00
Luria_Delbruck_2022
Luria-Delbruck simulations for 2022 course at MPI for evolutionary biology
Language:HTML00
microfluidic_device
Simulating microfluidic device biophysics
Language:JavaScript0 1 00
ModelMEMS.github.io
Language:HTML00
odex-js
Bulirsch-Stoer integration of systems of ordinary differential equations in JavaScript
Language:TypeScript00
xenoseq
Pipeline to automate the comparison between short-read libraries to detect foreign ("xenotypic") sequences.
Language:Shell4 1 03

bramvandijk88/cacatoo
A javascript library for building, exploring, and sharing spatially structured models of biological systems
Language:JavaScript12 2 294
bramvandijk88/xenoseq
Pipeline to automate the comparison between short-read libraries to detect foreign ("xenotypic") sequences.
Language:Shell4 1 03
bramvandijk88/HGTvsDUP
Simple moran process of bacterial population undergoing HGT / duplications / deletions of genes.
Language:Python10
bramvandijk88/gapseq
Informed prediction and analysis of bacterial metabolic pathways and genome-scale networks
Language:R00
bramvandijk88/HGT_Genes_And_SGEs
Source code for "Slightly beneficial genes are retained by evolving Horizontal Gene Transfer despite selfish elements"
Language:R01
bramvandijk88/HGTvsDUP_nodejs
Nodejs implementation of HGTvsDUP
00
bramvandijk88/Luria_Delbruck_2022
Luria-Delbruck simulations for 2022 course at MPI for evolutionary biology
Language:HTML00
bramvandijk88/microfluidic_device
Simulating microfluidic device biophysics
Language:JavaScript0 1 00
bramvandijk88/ModelMEMS.github.io
Language:HTML00
bramvandijk88/odex-js
Bulirsch-Stoer integration of systems of ordinary differential equations in JavaScript
Language:TypeScript00
bramvandijk88/selfishDNA
Simulated model of the co-evolution of TEs and their host genome.
Language:C++