breezyzhao

FISH-counting

WXS-pipeline_mutation

CCLE_heterogeneity

CCLE_protein_dosage_compensation

Depository of all R files for the "Extensive protein dosage compensation in aneuploid human cancers" BioRxiv manuscript. Authors: KM Schukken and JM Sheltzer

celltypist

A tool for semi-automatic cell type annotation

datahub

A centralized location for storing curated data ready for inclusion in cBioPortal.

Davoli-Lab_HNSC_immune_infiltrate

flipPlots

immunedeconv

A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter)

mosaic

Tertiary analysis package to visualize single-cell data generated by the Tapestri Platform.

breezyzhao/flipPlots

breezyzhao/Davoli-Lab_HNSC_immune_infiltrate

breezyzhao/Proteogenomic-Analysis-of-Aneuploidy

breezyzhao/seurat

R toolkit for single cell genomics

breezyzhao/sns

Analysis pipelines for genomic sequencing data

breezyzhao/FISH-counting

breezyzhao/immunedeconv

A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter)

breezyzhao/celltypist

A tool for semi-automatic cell type annotation

breezyzhao/datahub

A centralized location for storing curated data ready for inclusion in cBioPortal.

breezyzhao/CCLE_heterogeneity

breezyzhao/WXS-pipeline_mutation

breezyzhao/CCLE_protein_dosage_compensation

Depository of all R files for the "Extensive protein dosage compensation in aneuploid human cancers" BioRxiv manuscript. Authors: KM Schukken and JM Sheltzer

breezyzhao/mosaic

Tertiary analysis package to visualize single-cell data generated by the Tapestri Platform.

breezyzhao/TCGA_HLA_benchmark

HLA from TCGA