brettin

biofilter

candle_tutorials

Tutorials for CANDLE

DepMap-Experiments

Experiments preparing data for fine-tuning and RAG using DepMap data

dl_tutorials

Deep learning tutorials

llm_tutorial

llm_tutorials

ML-training-inferencing

Ollama-Examples

Running Ollama examples

pilot1

polaris_examples

vagrant_builds

Contains a set of vagrant builds for various bioinformatics tools.

brettin/llm_tutorial

llm_tutorials

brettin/DepMap-Experiments

Experiments preparing data for fine-tuning and RAG using DepMap data

brettin/ML-training-inferencing

brettin/Ollama-Examples

Running Ollama examples

brettin/polaris_examples

brettin/sunspot_examples

Some basic examples to get running on sunspot

brettin/vLLM-Examples

brettin/70b_llama2_inference_alcf

Running inference using llama-2 70b on sunspot.

brettin/ARC

brettin/controlled-peptide-generation

source code for https://arxiv.org/abs/2005.11248 "Accelerating Antimicrobial Discovery with Controllable Deep Generative Models and Molecular Dynamics"

brettin/daos_examples

Some toy examples on using DAOS

brettin/dataframes

Tools to manipulate deep learning data frames

brettin/environment_transformers

Environments for ThetaGPU, Polaris and Aurora

brettin/genslm

GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics

brettin/global_survey

brettin/Langchain-Examples

toy examples

brettin/LangChain_examples

LangChain examples for AuroraGPT

brettin/liquidhandling

Mirror of https://xgitlab.cels.anl.gov/rarvind/liquidhandling

brettin/llm-workshop

brettin/long-form-factuality

Benchmarking long-form factuality in large language models. Original code for our paper "Long-form factuality in large language models".

brettin/pbsim2

PBSIM2: a simulator for long read sequencers with a novel generative model of quality scores

brettin/RAG

brettin/ray

Ray is a unified framework for scaling AI and Python applications. Ray consists of a core distributed runtime and a set of AI Libraries for accelerating ML workloads.

brettin/RayLLM-Examples

This repository contains information on running RayLLM

brettin/scalable-transformer

scalable transformer models

brettin/Simple_ODE_Examples

brettin/TPM_data

brettin/transformer_builds

Build scripts for various python environments for various transformer models.

brettin/user-guides

ALCF Systems User Documentation

brettin/zinc22-examples