/InteractionDB

A BridgeDb Derby database to map interactions from different databases to each other. This database can be used to annotate interactions in PathVisio and Wikipathways.

Primary LanguageJava

Interaction Bridge Database

This is a java application to create a BridgeDb derby database to map identifiers of interactions from different databases to each other. It has been created using the interaction mapping from Rhea (http://www.ebi.ac.uk/rhea/). The identifier from Rhea is mapped to identifiers from Enzyme Code, EcoCyc, MetaCyc, Macie, Reactome, Kegg Reaction, Unipathway, and Uniprot. This database can be used to annotate interactions in PathVisio(http://www.pathvisio.org/), which are displayed in Wikipathways (http://wikipathways.org/index.php/WikiPathways) as linkouts to the corresponding databases fetched through the webservice from BridgeDB.

Find the build information in our Wiki