Installation instructions do not work with micromamba
Opened this issue · 1 comments
tstraub89 commented
Hi Lucas (and Bruce)!
Since StrainGE requires python ≥3.9,<3.10, not specifying python=3.9 during creation of the environment will cause the installation to fail.
Hope all is well!
Tim
lrvdijk commented
The bioconda ecosystem is a little bit of a mess these days with many packages only being built for a limited number of Python versions. I've asked on their Github issues page why this is the case. As a workaround, the PyPI version should just install fine.
And you could specify that in your mamba env as:
dependencies:
..
pip:
- strainge