Pinned Repositories
poasta
Fast and exact gap-affine partial order alignment
pyfrost
Python bindings for Bifrost with a NetworkX compatible API
StrainGE
strain-level analysis tools
af-phylogeny
Python module to generate a phylogeny tree without using sequencing alignment.
dotfiles
Several configuration files for vim, zsh, tmux and more.
spice-plot
A Python library to plot simulation results created with ngspice/ltspice with matplotlib.
tlc5940-raspberry
A C++ library to control the TLC5940 LED driver on your raspberry pi.
rPlace2022
Python version of PlaceNL's headless bot with automatic access token refresh
lrvdijk's Repositories
lrvdijk/ledstrip-dmx-receiver
KiCad Project for a DMX receiver driving a LED strip with 5050 SMD RGB LEDs.
lrvdijk/pattern-mining
lrvdijk/vispy
Main repository for Vispy
lrvdijk/distributed-ngs
Distributed next generation sequencing pipeline. Created as part of a study assignment.
lrvdijk/dotfiles
Several configuration files for vim, zsh, tmux and more.
lrvdijk/adventofcode18
Rust solutions to puzzles on adventofcode.com
lrvdijk/bifrost
Bifrost: Highly parallel construction and indexing of colored and compacted de Bruijn graphs
lrvdijk/bioconda-recipes
Conda recipes for the bioconda channel.
lrvdijk/colander
Filter a (short) read data set based on a list of k-mers (or DNA sequences in general)
lrvdijk/cs4065
Multimedia Search and Recommendation course
lrvdijk/ctag
Graph genome browser
lrvdijk/django-rest-framework-gis
Geographic add-ons for Django Rest Framework
lrvdijk/hdmedians
High-dimensional medians (medoid, geometric median, etc.). Fast implementations in Python.
lrvdijk/hmm_rust
Personal playground to implement an HMM in rust
lrvdijk/hugo
The world’s fastest framework for building websites.
lrvdijk/hugo-academic
The personal website framework for Hugo. Demo at
lrvdijk/jupyter-notebooks
Collection of several jupyter notebooks
lrvdijk/kicad-lib
Personal KiCad components and references to other useful libraries
lrvdijk/led-strip-controller
Hardware project to chose the color of a RGB LED strip with a potentiometer, created using KiCad
lrvdijk/lrvdijk.github.io
Personal website
lrvdijk/lucasvandijk.nl
📝 Easily create a beautiful website using Academic, Hugo, and Netlify
lrvdijk/lucasvandijk.nl_old
Hugo based website for lucasvandijk.nl
lrvdijk/mob-suite
MOB-suite: Software tools for clustering, reconstruction and typing of plasmids from draft assemblies
lrvdijk/nl-height
Code for visualising the height of the Netherlands using AHN2 data
lrvdijk/petgraph
Graph data structure library for Rust.
lrvdijk/range-set-blaze
Integer sets as fast, sorted, integer ranges with full set operations
lrvdijk/rethinking
Code for Statistical Rethinking exercises in Pyro
lrvdijk/rPlace
lrvdijk/rust-bio
This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.
lrvdijk/vispy-test-data
Storage for image test results