broadinstitute/StrainGE

Installation error with incompatible scipy version

Opened this issue · 1 comments

Both conda and manual installation installed scipy version1.18.1 which causes a compatibility issue leading to an Importerror with scipy.stats
I was able to resolve the error with downgrading scipy version to 1.10. But it would be really helpful to include the tested versions of all dependencies in the yaml file in case such incompatibilities occur with any other packages.

The version on PyPI should work with newer SciPy versions, I'm working on an updated conda package!