/cupynumeric

An Aspiring Drop-In Replacement for NumPy at Scale

Primary LanguagePythonApache License 2.0Apache-2.0

cuNumeric

cuNumeric is a Legate library that aims to provide a distributed and accelerated drop-in replacement for the NumPy API on top of the Legion runtime. Using cuNumeric you do things like run the final example of the Python CFD course completely unmodified on 2048 A100 GPUs in a DGX SuperPOD and achieve good weak scaling.

drawing

cuNumeric works best for programs that have very large arrays of data that cannot fit in the memory of a single GPU or a single node and need to span multiple nodes and GPUs. While our implementation of the current NumPy API is still incomplete, programs that use unimplemented features will still work (assuming enough memory) by falling back to the canonical NumPy implementation.

If you have questions, please contact us at legate(at)nvidia.com.

  1. Installation
  2. Dependencies
  3. Building from Source
  4. Usage and Execution
  5. Supported and Planned Features
  6. Supported Types and Dimensions
  7. Documentation
  8. Future Directions
  9. Contributing
  10. Known Bugs

Installation

cuNumeric is available on conda:

conda install -c nvidia -c conda-forge -c legate cunumeric

Pre-built docker images containing all Legate libraries, as well as specialized install scripts for supported clusters are available on the quickstart repo.

Read on for general instructions on building cuNumeric from source.

Dependencies

Users must have a working installation of the Legate Core library prior to installing cuNumeric.

cuNumeric requires the following:

  • Python >= 3.7
  • CUDA >= 8.0
  • GNU Make
  • C++14 compatible compiler (g++, clang, or nvc++)
  • Fortran compiler (for building OpenBLAS; not necessary if you provide a pre-built version of OpenBLAS)
  • the Python packages listed in conda/cunumeric_dev.yml

See the corresponding section on the Legate Core instructions for help on installing the required Python packages using conda.

Building from Source

Installation of cuNumeric is done with either setup.py for simple uses cases or install.py for more advanced use cases. The most common installation command is:

python setup.py --with-core <path-to-legate-core-installation>

This will build cuNumeric against the Legate Core installation and then install cuNumeric into the same location.

Note that after the first invocation of setup.py this repository will remember which Legate Core installation to use and the --with-core option can be omitted unless the user wants to change it.

Advanced users can also invoke install.py --help to see options for configuring cuNumeric by invoking the install.py script directly.

Of particular interest to cuNumeric users will likely be the option for specifying an installation of OpenBLAS to use. If you already have an installation of OpenBLAS on your machine you can inform the install.py script about its location using the --with-openblas flag:

python setup.py --with-openblas /path/to/open/blas/

Usage and Execution

Using cuNumeric as a replacement for NumPy is easy. Users only need to replace:

import numpy as np

with:

import cunumeric as np

These programs can then be run by the Legate driver script described in the Legate Core documentation.

legate cunumeric_program.py

For execution with multiple nodes (assuming Legate Core is installed with GASNet support) users can supply the --nodes flag. For execution with GPUs, users can use the --gpus flags to specify the number of GPUs to use per node. We encourage all users to familiarize themselves with these resource flags as described in the Legate Core documentation or simply by passing --help to the legate driver script.

Supported and Planned Features

cuNumeric is currently a work in progress and we are gradually adding support for additional NumPy operators. Unsupported NumPy operations will provide a warning that we are falling back to canonical NumPy. Please report unimplemented features that are necessary for attaining good performance so that we can triage them and prioritize implementation appropriately. The more users that report an unimplemented feature, the more we will prioritize it. Please include a pointer to your code if possible too so we can see how you are using the feature in context.

Supported Types and Dimensions

cuNumeric currently supports the following NumPy types: float16, float32, float64, int16, int32, int64, uint16, uint32, uint64, bool, complex64, and complex128.

cuNumeric supports up to 4D arrays by default, you can adjust this setting by installing legate.core with a larger --max-dim.

Documentation

A complete list of available features can is provided in the API reference.

Future Directions

There are three primary directions that we plan to investigate with cuNumeric going forward:

  • More features: we plan to identify a few key lighthouse applications and use the demands of these applications to drive the addition of new features to cuNumeric.
  • We plan to add support for sharded file I/O for loading and storing large data sets that could never be loaded on a single node. Initially this will begin with native support for h5py but will grow to accommodate other formats needed by our lighthouse applications.
  • Strong scaling: while cuNumeric is currently implemented in a way that enables weak scaling of codes on larger data sets, we would also like to make it possible to strong-scale Legate applications for a single problem size. This will require leveraging some of the more advanced features of Legion from inside the Python interpreter.

We are open to comments, suggestions, and ideas.

Contributing

See the discussion of contributing in CONTRIBUTING.md.

Known Issues

  • When using certain operations with high scratch space requirements (e.g. einsum or convolve) you might run into the following error:
    LEGION ERROR: Failed to allocate DeferredBuffer/Value/Reduction in task [some task] because [some memory] is full. This is an eager allocation ...
    
    Currently, Legion splits its memory reservations between two pools: the "deferred" pool, used for allocating cuNumeric ndarrays, and the "eager" pool, used for allocating scratch memory for operations. The above error message signifies that not enough memory was available for an operation's scratch space requirements. You can work around this by allocating more memory overall to cuNumeric (e.g. adjusting --sysmem, --numamem or --fbmem), and/or by adjusting the split between the two pools (e.g. by passing -lg:eager_alloc_percentage 60 on the command line to allocate 60% of memory to the eager pool, up from the default of 50%).
  • cuNumeric can exercise a bug in OpenBLAS when it is run with multiple OpenMP processors
  • On Mac OSX, cuNumeric can trigger a bug in Apple's implementation of libc++. The bug has since been fixed but likely will not show up on most Apple machines for quite some time. You may have to manually patch your implementation of libc++. If you have trouble doing this please contact us and we will be able to help you.